Gene Information

Name : ribD (ABBFA_003310)
Accession : YP_002327186.1
Strain : Acinetobacter baumannii AB307-0294
Genome accession: NC_011595
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 3.5.4.26
Position : 3521682 - 3522767 bp
Length : 1086 bp
Strand : -
Note : [J] COG0049 ribosomal protein S7

DNA sequence :
ATGTCTGAGTTAAAACAAGATCAATACTGGATGCAGCAAGCCATTGAACTTGCCAAACGAGGACTCTATTCGACCAAGCC
TAATCCAAATGTTGGTTGTGTCATCGTCAAAGATAATCAGGTGATTGGTGAAGGTTTTCACCCTAAAGCTGGTCAGCCCC
ATGCGGAAGTTTTTGCATTACGTCAGGCAGGCGAACAGGCACAAGGCGCAACTGCTTATGTGACGCTTGAGCCGTGTGCT
CATTATGGGCGAACCCCTCCGTGTGCTGAGGCGCTGGTTAAGGCGCAAGTTAAAAAAGTGGTAGTGGCATGTCCTGATCC
AAACCCGCTTGTTGCAGGTAAAGGTGTTCAGATATTAAAAAATGCCGGTATTGAAGTAGAAATCGGTATTTGTGAAGATT
TGGCAGCTCAACTTAATCAAGGCTTTTTAAAAGCGATGTCTACAGGCATGCCATATGTACGACTAAAAGTTGCTTCTAGT
CTTGATGGGCGTACTGCAATGGCATCAGGTGAGTCGAAGTGGATTACAGGTTCTGCGGCCCGTCAAGATGTCCAACATTG
GCGTGCCATTTCAGGCGCCGTGATTACAGGCATTGATACTGTAATTGCCGATGACTGCCAACTTAATGTACGTTCACTTC
ATAATATTGATATCGAGACGGTTGTTCAGCCAAAACGAGTAATTCTAGATCGGAGAGGACGTTTACCGCTCACCGCTAAA
ATTTTAGAAAATCCTGAAACTGTCATGGTGATGGGGCCATATCGTCAGGAACTCGCTGACTTAGGCGTGATACAATTAGA
AATTCAGCCTTTAAAAACACTATTACAGACCTTATCTAAGCAATACCAAATTTATGATGTGCTGATCGAGGCTGGCGCGA
CATTATCAAGTGCCTTTTTGCAAGAAGGCTTGATTGATGAAATGATCAGTTATGTGGCTCCAACTTTATTGGGGCAACGT
GCAAGAGCCATGTTCAATGCAGATTTTGAATATATGGCACAGCAACTTCGTTTTAAACTTCTTGATGTAACACAACTTGA
TCAAGATATACGCTTAAGGTTAATCCCTACGCAAGAGAAAGTATGA

Protein sequence :
MSELKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDNQVIGEGFHPKAGQPHAEVFALRQAGEQAQGATAYVTLEPCA
HYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILKNAGIEVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASS
LDGRTAMASGESKWITGSAARQDVQHWRAISGAVITGIDTVIADDCQLNVRSLHNIDIETVVQPKRVILDRRGRLPLTAK
ILENPETVMVMGPYRQELADLGVIQLEIQPLKTLLQTLSKQYQIYDVLIEAGATLSSAFLQEGLIDEMISYVAPTLLGQR
ARAMFNADFEYMAQQLRFKLLDVTQLDQDIRLRLIPTQEKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-161 99
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-161 99