Gene Information

Name : ABBFA_002624 (ABBFA_002624)
Accession : YP_002326522.1
Strain : Acinetobacter baumannii AB307-0294
Genome accession: NC_011595
Putative virulence/resistance : Resistance
Product : ABC transporter family protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2785292 - 2785984 bp
Length : 693 bp
Strand : -
Note : [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
ATGCCACAACCTATCATTGCTGCCCATCAAGTTACACAAACTATTCAGATTAACCAAAATCAATTTACGATTTTAAAAAA
TATTGATTTAGAGATTTATAAAGGGGAGCAGGTAGCCATTACGGGACGTTCTGGTTCAGGGAAATCGACTTTACTGGGTA
TTTTAGCGACTTTAGACCAACCCTCTGAAGGTGAGGTGTGGTTATGTGGTCAGGCGGTTCATGAGTTAACAGAAGAGCAG
CGCGCTCAAATTCGAATGCAGCATATTGGTTTTGTATTTCAGTCTTTTCAGCTTTTGCCACAGTTAAGTGCGCTTGAAAA
CGTGATGTTGCCGCTTCGGTTACGTAAAGATTTTGATTATAAAATTGCTGAGCAGAAGGCCTTAGATTGGTTGCATCGGG
TAGGTTTAAGCCGTCAAGCGGAACAAACGCCTAAAGTCTTATCTGGTGGAGAGCAGCAACGTGTGGCAATTGCACGGGCA
CTTATTGCAGAACCACAAATTATTTTTGCAGATGAACCTACTGGAAACCTAGATGGTCAAACAGCCCAAGAAATTGAACG
ACTACTTTTTGATTTAAATGAAGAGCTCGGTACAACGCTTATTTTGGTCACACATGACCGTAATTTGGCTGGACTTTGCC
AACGTCATGTTGAATTAAATGATGGCCGACTAAAGACAGTACAGGGTGGTTAG

Protein sequence :
MPQPIIAAHQVTQTIQINQNQFTILKNIDLEIYKGEQVAITGRSGSGKSTLLGILATLDQPSEGEVWLCGQAVHELTEEQ
RAQIRMQHIGFVFQSFQLLPQLSALENVMLPLRLRKDFDYKIAEQKALDWLHRVGLSRQAEQTPKVLSGGEQQRVAIARA
LIAEPQIIFADEPTGNLDGQTAQEIERLLFDLNEELGTTLILVTHDRNLAGLCQRHVELNDGRLKTVQGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-30 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-30 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-30 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABBFA_002624 YP_002326522.1 ABC transporter family protein NC_012469.1.7686878. Protein 3e-38 50
ABBFA_002624 YP_002326522.1 ABC transporter family protein NC_008702.1.4606598. Protein 2e-33 48
ABBFA_002624 YP_002326522.1 ABC transporter family protein NC_012469.1.7686946. Protein 7e-25 42
ABBFA_002624 YP_002326522.1 ABC transporter family protein CP001581.1.gene798.p Protein 9e-33 42
ABBFA_002624 YP_002326522.1 ABC transporter family protein NC_012469.1.7685735. Protein 2e-31 41