Gene Information

Name : dnaB (ABBFA_001290)
Accession : YP_002325193.1
Strain : Acinetobacter baumannii AB307-0294
Genome accession: NC_011595
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 1386279 - 1387724 bp
Length : 1446 bp
Strand : -
Note : [L] COG0305 Replicative DNA helicase

DNA sequence :
ATGTCTCAGGCGAATGCCACTTCTTTAACCCTTTCATCTCCAACAGAAAATAAGACGAGTGAATCAGGCCAACTTAAAGA
GTTTCGCACTCCCCCACACAATTTAGCCATTGAGCAAGCTGTACTTGCTGCGCTGATGACCGTTGCTGAATCTTTTGAAC
AAGTCAGTGACTTACTCAAAGAAAATGATTTTTATGCCACTCGTCATAAATATATTTATCGTGCAATTGAAAAATTAGCA
CAGGAAAACTCACCGTATGATGCGGTTTTGGTCAACGACTGGCTTTTAAAACAAAATTTACTCGATGCGATTGGCGGTGA
AGAATATTTGATGCAGCTTATGGCTGACTCACCTTCGAGTTTCTATAATCTTGAAACTTATGCGACTAAAATTAAAGAAT
TTTCTACACTACGCAGTATGATTAAGGTAAGTACTGAAATTTTACAAAATGCTTACGACACAAAAGGTCGAGGTGTAAGT
GAAATTTTAGATTTAGCCGAAACGAGTATTTTCTCTTTAGCAGAACAACATAACAACAATAAAAAAGATTCTGGACCTAA
AGCAATTAGTTCTGTAACTGCCGATGTAATTAGTAAACTTGATGAACTTTCAAAATTAGACGGAAATATTACTGGTTTAA
CGACTGGCTTCTTAGAGCTCGATAATAAAACCTCTGGTATGCAACCAGGTGATTTGATTATTGTCGCAGCACGTCCATCT
ATGGGTAAAACTACTTTCGCCATGAACTTGGTTGAAAGTGTTTTGCAATACAATAAACTCCCAGCTCTCGTCTTCTCTAT
GGAGATGCCAGCAGACTCTATTGCGATGCGTCTCATTTCAGCTATGGGTAAAGTGCATCAAGGGCATTTACGTTCAGGTA
ATTTGGATGCTGATGAATGGACTAAAGTAACGGGTACCATTCTGCAACTTCAACAAATGCATTTGTATATTGATGATTCC
TCTGCCCTACCACCTACTGAAGTTCGTGCGCGAGCTAGACGTATCGCAAAAATGCATGACGGTAAAATCGGCTGTATCAT
GGTCGACTATTTACAGTTGATGAAAGTTCCGGGCATGGGTGACAACCGTGTTGGTGAGATCTCGGAAATTTCACGTAGCT
TAAAAGCTTTAGCTAAAGAAATGAACTGTCCTGTGATTGCACTATCTCAGCTTAACCGAAGTCTGGAAAACCGACCGAAT
AAACGTCCAGTAATGTCTGACTTACGTGAATCTGGTGCGATTGAACAGGATGCCGACTTAATCATGTTTATTTACCGTGA
TGAAGTCTATAACAAAGAATCGAAAGAAGCAGGCACCGCAGAAATTATCATCGGTAAACAGCGTAATGGTCCAATCGGTA
CTGTTCGCCTTGCCTTTGAAGGCCAATATACTCGTTTTAGTAATCTCTCTCCTGAGTATTACAGCCAATATGATGATGAA
GAATAA

Protein sequence :
MSQANATSLTLSSPTENKTSESGQLKEFRTPPHNLAIEQAVLAALMTVAESFEQVSDLLKENDFYATRHKYIYRAIEKLA
QENSPYDAVLVNDWLLKQNLLDAIGGEEYLMQLMADSPSSFYNLETYATKIKEFSTLRSMIKVSTEILQNAYDTKGRGVS
EILDLAETSIFSLAEQHNNNKKDSGPKAISSVTADVISKLDELSKLDGNITGLTTGFLELDNKTSGMQPGDLIIVAARPS
MGKTTFAMNLVESVLQYNKLPALVFSMEMPADSIAMRLISAMGKVHQGHLRSGNLDADEWTKVTGTILQLQQMHLYIDDS
SALPPTEVRARARRIAKMHDGKIGCIMVDYLQLMKVPGMGDNRVGEISEISRSLKALAKEMNCPVIALSQLNRSLENRPN
KRPVMSDLRESGAIEQDADLIMFIYRDEVYNKESKEAGTAEIIIGKQRNGPIGTVRLAFEGQYTRFSNLSPEYYSQYDDE
E

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 5e-77 46
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 9e-88 45
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 4e-80 43
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 4e-80 43
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 8e-78 43
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 8e-84 42
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 5e-84 42
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 4e-84 42