Gene Information

Name : Blon_0873 (Blon_0873)
Accession : YP_002322351.1
Strain : Bifidobacterium longum JCM 1222
Genome accession: NC_011593
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 1030045 - 1031766 bp
Length : 1722 bp
Strand : +
Note : PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; KEGG: blo:BL1348 ATP binding protein of ABC transporter

DNA sequence :
ATGAGCATTATGAGTGAACAGCGTCAACATAATCTGGCCGACATCAAGGATCTGTCCGTCTCCTTCATGACCGATGCGGG
CTCCATCAAAGCCGTAGAGAACGTGAATTTCACGATCCCACGTAAAACCGTGGTCGGCGTGGTCGGCGAATCCGGCTCCG
GCAAATCCGTGACCGCCCGCTCCATCATCAAACTGTTGCCGGAAACCGCCACCACGTCGGGAGCGGTGTACCTTTCCCGG
CGTGACGGCTCCGATGGCCTGGACGTGCTCTCGCTTTCCGGCGAACAGCTGCGCGACATGCGTGGATCCGAAGCCGCGAT
GGTCTTTCAGGAGCCGAACTCGGTGCTCAACCCGGTGTACACGATCGGATGGCAGATCGAGGAGGGCCTGCGCGCCCACG
GGCTGAAGGACAGGAAGAAGCTGCGCGCCAAAGCCGTCGACATCCTGAACAAGGTCGGCATCCCCGACGCCGAGACCCGC
GTGGATTATTACCCCCATCAGTTCTCCGGCGGTCAGAAGCAGCGCATCGTCATCGCCATGGCGTTGGTGCTCAACCCCGG
CCTCATCCTGGCCGACGAGCCCACCACCGCTCTGGACGTGACGGTCCAGGCCGAGATTCTCGACCTACTTCGTCTGGCGC
GAGACGAATTCGATGCGTCCGTGCTCATCATCACCCACAACATGGGCGTGATCGCCGACATCGCCGACCAGGTGGTGGTG
ATGTACCGTGGACACGTGGTCGAACAAGGCACCGTGGAGCAGGTGTTCTACGACCCGAAGAACGACTACACCAAGCGCCT
CCTGGGCGCGGTGCCGCGTGTCGGCCAGAAGCTGGTCGTGCGCGATCCGGACGGTCGCGTGATCGAACGCAAATCCGATT
GGCGCGAGCAGCCGGTGGCCGTCGAGGCCAAGGGATTGACGATCACGTATCCCGGGCATCTGATGCAACCCGATTTCAAG
GCCGTGGACGGCGTGGACTTCACGATTCACCGTTCCGAAGTGCTCGGCCTGGTGGGTGAATCCGGTTCCGGCAAATCCAC
CACCGGTCGTGCCATCGCCGGCCTGCAGAAAGTGTCCGGCGGGTCATTGAACGTGCTTGGCGTGGAGATGAACGGTGTCA
GGGAGCGGGACTTCAAACCCAAGCGCGCCGACATCGGCTTCGTGTTCCAGGATCCCGGCTCCTCGTTCAACCCGTTGATG
ACCATTGCGGAAAACGTGGCCGAACCGCTGATCGTGCACAGGAAGTATGGTTCGGTGGCCGAGGCTAGGGACTATGTGGG
AGATCTGTTGGAGATGGTGCAGTTGCCGCGCGCCTACATGAACCGTTTCCCCCACGAGCTTTCCGGCGGGCAGCGTCAGC
GCGCCTCGCTGGCACGGGGCCTGGCCCTGAAGCCCTCCCTGCTGATCGCGGACGAGCCGACATCGGCTTTGGACGTGTCG
GTTCAGGCCAAGGTGCTGGAGCTGTTCAAGCGGCTGCAGGCGGAGATCGGCTTCGCCTGCCTGTTCATCACCCACGATCT
GGCGGTGGTGGATATGCTCGCCGACCGCGTCATGGTGATGCATAAGGGGCGGATCGTGGAGCATGGCGACGCCGATCAGA
TCATGCGGCATCCGCGCAACGCCTACACGCAGAAGCTGTTGGCCTCCCTGCCGGTGCCCGATCCGCGCGAGCAGAGGCTG
CACCGCGCGCATCTTCACGAACTGCTCGCCAGCGGGAAGTAA

Protein sequence :
MSIMSEQRQHNLADIKDLSVSFMTDAGSIKAVENVNFTIPRKTVVGVVGESGSGKSVTARSIIKLLPETATTSGAVYLSR
RDGSDGLDVLSLSGEQLRDMRGSEAAMVFQEPNSVLNPVYTIGWQIEEGLRAHGLKDRKKLRAKAVDILNKVGIPDAETR
VDYYPHQFSGGQKQRIVIAMALVLNPGLILADEPTTALDVTVQAEILDLLRLARDEFDASVLIITHNMGVIADIADQVVV
MYRGHVVEQGTVEQVFYDPKNDYTKRLLGAVPRVGQKLVVRDPDGRVIERKSDWREQPVAVEAKGLTITYPGHLMQPDFK
AVDGVDFTIHRSEVLGLVGESGSGKSTTGRAIAGLQKVSGGSLNVLGVEMNGVRERDFKPKRADIGFVFQDPGSSFNPLM
TIAENVAEPLIVHRKYGSVAEARDYVGDLLEMVQLPRAYMNRFPHELSGGQRQRASLARGLALKPSLLIADEPTSALDVS
VQAKVLELFKRLQAEIGFACLFITHDLAVVDMLADRVMVMHKGRIVEHGDADQIMRHPRNAYTQKLLASLPVPDPREQRL
HRAHLHELLASGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-66 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-66 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 4e-66 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-66 41