Gene Information

Name : Blon_0702 (Blon_0702)
Accession : YP_002322184.1
Strain : Bifidobacterium longum JCM 1222
Genome accession: NC_011593
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 804842 - 807427 bp
Length : 2586 bp
Strand : +
Note : PFAM: UvrB/UvrC protein; AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: blo:BL0010 protease

DNA sequence :
ATGTTCGAACGGTTTACCGACCGTGCACGGCGCGTGATCGTGTTGGCGCAGGAAGAGGCGAGGGCCCTTCAGCACAACTA
CATTGGCACCGAACACCTGCTGCTCGGCCTGATCCGCGAAGGTGAGGGCGTGGCCGCCAAGGCGCTCGCCTCGAAGGGCG
TGGAGCTGGATGCCACCCGCAAGCAGGTCGAAGAGATGATCGGCAAGGGCAACGCGGCGCCGAACGGGCACATCCCCTTT
ACCCCGCACGCCAAGCAGGTGCTGGAGTTTTCGCTGCGTGAAGCCCTGCAGCTGGGCCACAGCTACATCGGCACCGAGCA
CATCCTGCTCGGATTGATCCGCGAAGGTGAGGGCGTGGGCACCCAGGTGCTCATCAAGATGGACGTCGATCTGGGCGAAT
TGCGCAGCGCGACCATCGATATGATCCGCGGCAACTCCGGCACTGGCGACGGCAAGGGCGAACTGGCCAATGCCGGCGGC
GTGGCGGACAAGCAGAACAAGTCCGGTTCCGCCATCCTCGACCAATTCGGACGCAACCTGACCGCCGAAGCCGCCGAAGG
CAAGCTGGACCCGGTCATCGGCCGTACCAACGAGATCGAACGCGTCATGGTCGTGCTTTCCCGACGCACCAAGAACAATC
CGGTGCTGATCGGCGAACCGGGAGTGGGCAAGACCGCCGTGGTCGAAGGCTTGGCCCAGAAAATCCAAGCCGGCGACGTG
CCGGAAACCCTGAAGGGCAAGCAGGTCTACTCGCTGGACCTCGGTTCCATGGTGGCCGGCTCCCGCTACCGTGGTGATTT
CGAGGAGCGCCTGAAGAAGGTGCTGAAGGAGATCAAGACCCGCGGCGACATCGTGCTGTTCATCGACGAGATTCACACCA
TCGTGGGCGCCGGCTCGGCCGACGGCGCGCTGGGTGCCTCCGACATGTTGAAGCCGATGCTGGCCCGTGGCGAGCTCCAG
ACCATCGGTGCCACTACCACCGACGAGTACCGCAAGTACATCGAGAAGGACGCGGCTCTGGAACGTCGATTCCAGCCGAT
TCAGGTGCACGAGCCGACCATCGCCGAGACCATCGAGATCCTGAAGGGCCTGCGTTCCCGTTACGAGAACCACCACCACG
TGACCATCACCGATGGCGCGCTGCAGTCCGCCGCAGAGCTGTCCAGCCGGTACATCCAGGACCGTAACCTGCCTGACAAG
GCCATCGACCTGATCGATGAGGCCGGTGCACGCCTGCGCATCAAGCGCCTGACCGCCCCGCCTGAGCTCAAGGAACTCGA
CGAGAAGATCGCCAAGATCGCCGCCGACAAGGACGAGGCCATCAAGGGCCAGGACTTCGAGAAGGCCGCCGAACTGCGCG
ACAAGCAGGAGAAGCTGGAAGCCGATCGCAAGCAGAAGGAAGACTCCTGGCGCGAAGGCGAGTCCGACGTCAAGATGGTT
GTGGACGAGGACGTGATCGCCGAGGTCATCAGTTCCACCACCGGTATCCCGGTGTTCAAGCTGACCCAGGCCGAGTCCAA
GAAACTGCTCAGCATGGAGACGGAGCTGCACAAGCGCATCATCGGTCAGGATGAAGCGGTTTCCGCTTTGTCACGGTCCA
TCCGACGCACCCGCGTGGGATTGAAGGACCCGAAGCGCCCGTCCGGCTCGTTCATCTTCGCCGGCCCCACCGGCGTCGGC
AAGACCGAGCTGGCCAAGACGCTCGCCGAGTTCCTGTTCGACGATGAGGACGCGCTGATTCGCGTGGACATGTCCGAGTT
CTCCGAGAAGTACGCGGCTTCGCGACTCTTCGGCGCGCCTCCGGGATACGTCGGCTACGAGGAGGGCGGCGAGCTCACCG
AAAAGGTGCGCCGCAAGCCGTTCTCCGTGGTGCTGTTCGACGAGATCGAAAAGGCTCATCCGGACATCTTCAACACGCTG
CTGCAGGTGCTCGATGACGGCCACCTGACCGACGGTCAGGGCCGCAAGGTGGACTTCAAGAACACCATCATCATCCTGAC
CACCAACCTCGGTACGCGAGACATCGCCAAGGCCGCCAACACGGGCTTCAACCTGGGTGCCAACAACGAGTCCAGCTACC
AGCGCATGAAGGACCAGGTCAGCTCCGAATTGAAGCAGCAGTTCCGCCCGGAGTTCCTGAACCGTCTGGACGACATCATC
GTCTTCAAGCAGCTCACCGAGCCGCAGGTGCGCCAGATCGTGGATCTGGATGTCAAGCAGCTCAACGACCGCCTGTTCGA
CCGTCATATGTCGCTCGAACTCACCGACGCCGCCAAGGACCTGCTCGCGCAGAAGGGCTTCGACCCGCTGCTCGGTGCCC
GTCCGCTGCGCCGCGTGATTCAGCGTGACATTGAGGACGCCATCTCCGAGAAGATCCTGATGGGAGATCTCGAGGACGGT
CAGCGCGTGATGGTGGATGCGGAAGGCGAGGGTATCCTTGGCGAATTCACCTTCAAGGGTGAGAAGTTCGAGGAGCCGGC
CGTCGCCGATAAGCCCGCCGAAGCCGGTGCCGCCAACGATGCCGAAACTTCGTCCGAAGCCGCACCCGTGCACGCTGACG
ATTCTGGCGACGCTGCGCAGGAGTAG

Protein sequence :
MFERFTDRARRVIVLAQEEARALQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATRKQVEEMIGKGNAAPNGHIPF
TPHAKQVLEFSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGELRSATIDMIRGNSGTGDGKGELANAGG
VADKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTNEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIQAGDV
PETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQ
TIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDGALQSAAELSSRYIQDRNLPDK
AIDLIDEAGARLRIKRLTAPPELKELDEKIAKIAADKDEAIKGQDFEKAAELRDKQEKLEADRKQKEDSWREGESDVKMV
VDEDVIAEVISSTTGIPVFKLTQAESKKLLSMETELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSFIFAGPTGVG
KTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTL
LQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAANTGFNLGANNESSYQRMKDQVSSELKQQFRPEFLNRLDDII
VFKQLTEPQVRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGDLEDG
QRVMVDAEGEGILGEFTFKGEKFEEPAVADKPAEAGAANDAETSSEAAPVHADDSGDAAQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Blon_0702 YP_002322184.1 ATPase AAA VFG0079 Protein 0.0 57
Blon_0702 YP_002322184.1 ATPase AAA VFG0080 Protein 7e-136 50