Gene Information

Name : Blon_0468 (Blon_0468)
Accession : YP_002321960.1
Strain : Bifidobacterium longum JCM 1222
Genome accession: NC_011593
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 537385 - 538188 bp
Length : 804 bp
Strand : -
Note : PFAM: SMC domain protein; ABC transporter; SMART: AAA ATPase; KEGG: sma:SAV5430 ABC transporter ATP-binding protein

DNA sequence : 
ATGAAAAAACAACCAAATGACTTCATTGGGGTAAATACATATTTATCGGTTCAGGCGCGTGGGTTGGTCAAGCGTGTGGT
TTCCGCTGATGGTTCCAGTCCGAGTGTGATTCTCAATGATGTCTCGTTGGATATTCCCGGTGCCGGGTTGACAGCGATCG
TCGGGCCTTCGGGTGCGGGTAAGACCTCTTTGTTGTACGTGTTGTCCGGTTTGGACAGGCCCGACTCGGGTCGGGTCGTC
ATCGGCGGCACCGACATCTACGCGTTGGACGAGGAGCGTCGTTCGCGGTTCATCCGCGGGCATATCGGTTTCGTGTTCCA
GCAGTACAACCTCGTGCCGTATCTGACGGTCGAGGAGAACGTGATGCTGCCGCTCTCGCTCGCCCATCGCAAGGCCGACT
ACATTCGGGTCACGCAGCTGTTGTCCCGGTTCGGCCTGCGCCGGAGGGCGAGGACCGTGGTGAGCGCCCTGTCCGGCGGC
GAGCAGCAGCGCGTGGCCCTGTGCCGGGCCCTGCTCTTGCGCCCGGCGGTGGTGTTCGCCGACGAGCCCACCGGCGCGCT
CGACACCGCGAACAGCGAGCTCGTGCTGCAGGTGCTGCGCGAGCTGGCGGATTCGGGTTCCAACGTGGTCATGGTCACGC
ATGACACGGACGCCGCCGCCCTGGCCGACCGCGTGGTCTTCCTGCGTGACGGCGGAATCACCCACATCGCGGGCAGACTG
ACCGCTGGGCAGATCGTCGAGGGCATGCGCCGCACGTTCGAGCCGGCCATGCCGCAGCACGGTCAGGAGGCCCGTCGTGG
GTAG

Protein sequence : 
MKKQPNDFIGVNTYLSVQARGLVKRVVSADGSSPSVILNDVSLDIPGAGLTAIVGPSGAGKTSLLYVLSGLDRPDSGRVV
IGGTDIYALDEERRSRFIRGHIGFVFQQYNLVPYLTVEENVMLPLSLAHRKADYIRVTQLLSRFGLRRRARTVVSALSGG
EQQRVALCRALLLRPAVVFADEPTGALDTANSELVLQVLRELADSGSNVVMVTHDTDAAALADRVVFLRDGGITHIAGRL
TAGQIVEGMRRTFEPAMPQHGQEARRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-30 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Blon_0468 YP_002321960.1 ABC transporter NC_008702.1.4606598. Protein 2e-29 43
Blon_0468 YP_002321960.1 ABC transporter CP001581.1.gene798.p Protein 4e-35 42
Blon_0468 YP_002321960.1 ABC transporter NC_012469.1.7686946. Protein 1e-25 42