Gene Information

Name : Blon_1994 (Blon_1994)
Accession : YP_002323439.1
Strain : Bifidobacterium longum JCM 1222
Genome accession: NC_011593
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 2174067 - 2174942 bp
Length : 876 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGACGCAGAATCGTGCGGAACTCAACCGTAATCTGGCCCAGATGCTCAAGGGCGGCGTGATCATGGACGTCACCACGCC
CGAACAGGCGAAAATCGCGCAGGACGCCGGCGCCTGCGCGGTGATGGCGCTGGAGCGCATCCCCGCTGACATTCGCGCCG
CCGGTGGCGTCTCCCGCATGAGCGACCCGGCCATGATCAAGGGCATTCAGGAAGCTGTCTCGATTCCGGTCATGGCCAAG
GTGCGCATCGGCCACATCGCCGAAGCCCGCATTCTGCAGGCCATCGAAATCGACTACATCGACGAATCCGAAGTGCTTTC
CCCGGCCGACGACGTGTACCACATCGACAAGAACCAGTTCGACGTGCCGTTCGTGTGCGGCGCGAAGAACCTGGGCGAGG
CGCTGCGCCGCATCGCCGAGGGTGCTGCCATGATTCGCACCAAGGGCGAGCCCGGCACCGGCGACGTGATTCAGGCCGTG
CGTCATATGCGCACCATGAATAAGCAGATCCGCGAACTCGTCGGCCTGCGCGACGACGAGGTGTACGAGGCGGCCAAGCA
GCTGGCCGTGCCATATGATCTGGCCAAGTACGTGCACGACAACGGCCGTCTGCCGGTCGTGAACTTCGCCGCCGGTGGCG
TGGCCACCCCGGCTGACGCCGCTCTGATGATGGAGCTCGGTGCTGAAGGCGTATTCGTGGGCTCCGGCATCTTCAAGTCC
GGCGACCCGGCCAAGCGCGCCGCCGCCATCGTCAAGGCCACTGCCAACTGGCAGGACGCCGATCTGCTCGCCAAGCTGTC
CGAAAACCTCGGCGAAGCCATGGTCGGCATCAACGAGGACGAGATTCAGACCATCATGGCCGCTCGCGGCGAGTGA

Protein sequence :
MTQNRAELNRNLAQMLKGGVIMDVTTPEQAKIAQDAGACAVMALERIPADIRAAGGVSRMSDPAMIKGIQEAVSIPVMAK
VRIGHIAEARILQAIEIDYIDESEVLSPADDVYHIDKNQFDVPFVCGAKNLGEALRRIAEGAAMIRTKGEPGTGDVIQAV
RHMRTMNKQIRELVGLRDDEVYEAAKQLAVPYDLAKYVHDNGRLPVVNFAAGGVATPADAALMMELGAEGVFVGSGIFKS
GDPAKRAAAIVKATANWQDADLLAKLSENLGEAMVGINEDEIQTIMAARGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-77 68
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-77 68
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-77 68