Gene Information

Name : Blon_0999 (Blon_0999)
Accession : YP_002322473.1
Strain : Bifidobacterium longum JCM 1222
Genome accession: NC_011593
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1184819 - 1185463 bp
Length : 645 bp
Strand : +
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: smu:SMU.654 ABC transporter, ATP-binding protein MutF

DNA sequence :
GTGAATAACGTATCTATAACCGTTCGGAGAGGTTCGATATACGGGCTGCTTGGCCCAAATGGCGCCGGTAAATCCACCAC
TCTGAAAATGATCACGGGCATGCTCCGTCCTACCAGTGGCAAGATTCTGTTTGATGGACATGAGTGGAGCAGAAGAGATC
TGGAACAGATCGGAGCTTTGATTGAAACTCCTCCACTGTATGAGAATCTTTCCGCAACGGAGAATTTGGAAGTCCGTGTG
AAGTTGCTGGATATTCCTAAAACCCGGATAGGTGAAGTTCTAAGAATAGTGGATCTGCAAGATACGGGACGGAAAAGAGC
CGGACAATTCTCAATGGGTATGAAACAACGTTTGGGAATAGCCATCGCTCTGTTGAATAGTCCCGAATTGTTGATCCTGG
ATGAGCCGACAAACGGATTAGACCCTATCGGCATACAAGAACTACGTTCTCTTATCCGTTCCTTCTCATCTAAAGGGATC
ACTGTTATTCTATCCAGTCATATTCTATCGGAAGTTCAGCTTATTGCTGACGATATTGGTATCATCTCAAATGGTGTTTT
GGGATATGAAGGACCAATGAATAAGGATCAGAACTTGGAAGAACTATTTGTCGAGGTTGTAAGGAAATCACAGGAAGAAC
GATAG

Protein sequence :
MNNVSITVRRGSIYGLLGPNGAGKSTTLKMITGMLRPTSGKILFDGHEWSRRDLEQIGALIETPPLYENLSATENLEVRV
KLLDIPKTRIGEVLRIVDLQDTGRKRAGQFSMGMKQRLGIAIALLNSPELLILDEPTNGLDPIGIQELRSLIRSFSSKGI
TVILSSHILSEVQLIADDIGIISNGVLGYEGPMNKDQNLEELFVEVVRKSQEER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 2e-39 49
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 2e-39 49
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 2e-39 49
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 2e-39 49
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 5e-31 47
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 6e-36 44
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 9e-36 44
SSU05_0910 YP_001198276.1 transport ATP-binding protein Not tested 89K Protein 4e-27 41
SSU98_0915 YP_001200473.1 transport ATP-binding protein Not tested 89K Protein 4e-27 41
Spaf_1095 YP_006309897.1 ABC multidrug transporter Not tested FWisland_1 Protein 4e-26 41