Gene Information

Name : AB57_0095 (AB57_0095)
Accession : YP_002317509.1
Strain : Acinetobacter baumannii AB0057
Genome accession: NC_011586
Putative virulence/resistance : Virulence
Product : VI polysaccharide biosynthesis protein VipB/tviC
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 99356 - 100378 bp
Length : 1023 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCCAATATCAAACAATATGTGAGCAATTAAAACAACAGCCAAAAAAGTGGTTAATCACTGGAGTTGCTGGTTTTAT
TGGCTCAAACTTACTTGAAACTTTATTAAAGCTAGATCAAAGCGTTGTCGGTTTAGATAATTTTGCAACAGGTCATCAAT
ATAATCTAGAAGAAGTCCAAGGTTTAGTTACATCAGAGCAGTGGGCTAGATTTACTTTTATTCAAGGTGACATACGTAAT
CTAGAAGAATGTCAAAAGGCATGTGCTGAAGTAGATTATGTATTGCATCAAGCAGCATTAGGTTCAGTACCTCGTTCCAT
TGCTGATCCAATTACAACAAATGCAGCAAATATTACTGGTTTTCTTAATATGTTAGTTGCTGCTAGAGATGCTAAAGTGA
AAAGTTTTACTTATGCTGCAAGTAGTTCTACTTATGGTGATCATCCGGCATTGCCAAAAGTTGAAGAAAATATTGGGAAT
CCATTATCTCCTTATGCTGTAACCAAGTATGTTAACGAGTTGTATGCTGACGTATTTGCTCGTACCTATGACTTTAAATG
TATTGGTCTACGTTATTTTAATGTATTTGGAAAACGCCAAGATCCGAATGGTGCATACGCTGCCGTAATACCAAAATGGA
CAGCTGCAATGATCCAAGATGAAGATGTTTTTATTAATGGTGATGGAGAAACAAGCCGAGATTTTTGCTTTATTGAAAAT
ACAGTCCAAGCTAATATTTTGGCGGCAACAACGACAAACGAAGAAGCAAAGAATCAAGTTTATAATGTTGCTGTAGGTGA
TCGAACCACTTTAAATGATTTGTTTAATGCAATTAAGAATGCATTGAGTGTAAATGAGATTACTTATGTTAAAAAGCCAA
TTTATAGAGATTTCCGTAAGGGAGATGTAAGGCATTCACAGGCATCTATTGAAAAAATTAAGAATTTACTAGGTTATGAT
GCTAAATATACTATTAACGAAGGTATCGATTTAGCAATCAACTGGTATAGTACTAAAATTTAG

Protein sequence : 
MSQYQTICEQLKQQPKKWLITGVAGFIGSNLLETLLKLDQSVVGLDNFATGHQYNLEEVQGLVTSEQWARFTFIQGDIRN
LEECQKACAEVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLVAARDAKVKSFTYAASSSTYGDHPALPKVEENIGN
PLSPYAVTKYVNELYADVFARTYDFKCIGLRYFNVFGKRQDPNGAYAAVIPKWTAAMIQDEDVFINGDGETSRDFCFIEN
TVQANILAATTTNEEAKNQVYNVAVGDRTTLNDLFNAIKNALSVNEITYVKKPIYRDFRKGDVRHSQASIEKIKNLLGYD
AKYTINEGIDLAINWYSTKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 1e-113 66
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 1e-113 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AB57_0095 YP_002317509.1 VI polysaccharide biosynthesis protein VipB/tviC VFG0430 Protein 6e-114 66