Name : gspE (AB57_0719) Accession : YP_002318121.1 Strain : Acinetobacter baumannii AB0057 Genome accession: NC_011586 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 765239 - 766729 bp Length : 1491 bp Strand : + Note : - DNA sequence : ATGCAAATATTGAAACAAATACAAGTTCCATATAGTTTTGCCAAGCGTCATGGTGTTTTATTTCGTTATGACGGTGATCA AGTTTTTATTGTTAGACGTCAAAATACAGAAAAAATTGCATTGCAGGAAGCAAGACGAATTTTGGGGAAACCTGCACACT ATCAATTATGCACTGAACAAGAATTCAATAGCCTATTAAGTACCAGTTATGCAGGTGATACAGGTGAATCTCAACAAGTC GCTGCGGGCTTAGAAGACCATCCGGATTTATTAAGCCTTGCAGATCAGGTGCCTGAAACAGAAGACTTAATGGATCAAGA GGATGACGCGCCTATTGTTCGTCTAATCAATGCTCTTCTCTCTGAGGCAATTCGTGTTGGAGCTTCAGATATCCATATTG AAGCCTTTGAGAAAAAGCTATCAGTTCGTTTACGGGTAGATGGTCAATTACGTGAAATTGTGCAGCCACGCCGTGAACTG GCCCCGTTACTTGTTTCGCGTATTAAAGTTATGGCGAAACTCGATATTGCCGAAAAGCGTGTACCGCAAGATGGGCGTAT TTCTTTACGTCTTGCTGGTCGTGAAGTCGATGTCCGTGTTTCAACTTTGCCATCGTCACATGGTGAAAGGGTGGTCATGC GTTTACTCGATAAACAAGCGGGTCGCCTTAATATGACTCACCTAGGTTTAATGGCAAATGACTATGAACGTTTAACTCAG CTAGTACATCGTCCGCACGGTATTATTTTGGTCACAGGGCCTACTGGTTCGGGGAAAACGACGACTTTATATGCTGCCTT ATCTGATCTAAATGACAATACCCGTAACATCTTAACTGCCGAAGATCCAATTGAGTATCAGCTTGAAGGTATTGGCCAAA CTCAAGTGAATACCAAAGTGGATATGACATTTGCTCGTGCTTTAAAGGCAATGTTACGTCAAGATCCAGATGTGGTCATG GTGGGGGAGATTCGTGATCTGGAAACTGCTGAAATTGCGGTTCAAGCATCTTTAACAGGTCATTTGGTTTTATCGACGCT ACATACCAATACTGCTATTGGTGCAGTGACTCGTCTTAAAGATATGGGGATTGAACCCTTCTTATTATCAAGTTCTTTAA TTGGGGTGGTTGCGCAGCGTTTGGTTCGTACTTTATGTCCACATTGTATGACATGGCGTGAAGCCGATACTTTTGAGAAG CAAGTTTTTCAGCATATTTCCCATGAACCAAGTTTAAAGTTACCAGAGGCTCAAGGGTGTGATCAGTGTTCTCATTTAGG GTTTAATGGCCGTACAGCGATTTATGAAATTGTACCTATTGATGAACCTATGCGCCGTCTCATTCATGGTAATGCAGCTG AATTTGAATTAGAAAATCATGCTCGTCAATATTCTGGTTCTATTCGCGATGATGGTTTACGTAAGGTGCTCTCAGGTAAA ACTACACTTGAAGAAGTGCTTCGTGTAACCAATGAAGCAAGTGAAGCATAA Protein sequence : MQILKQIQVPYSFAKRHGVLFRYDGDQVFIVRRQNTEKIALQEARRILGKPAHYQLCTEQEFNSLLSTSYAGDTGESQQV AAGLEDHPDLLSLADQVPETEDLMDQEDDAPIVRLINALLSEAIRVGASDIHIEAFEKKLSVRLRVDGQLREIVQPRREL APLLVSRIKVMAKLDIAEKRVPQDGRISLRLAGREVDVRVSTLPSSHGERVVMRLLDKQAGRLNMTHLGLMANDYERLTQ LVHRPHGIILVTGPTGSGKTTTLYAALSDLNDNTRNILTAEDPIEYQLEGIGQTQVNTKVDMTFARALKAMLRQDPDVVM VGEIRDLETAEIAVQASLTGHLVLSTLHTNTAIGAVTRLKDMGIEPFLLSSSLIGVVAQRLVRTLCPHCMTWREADTFEK QVFQHISHEPSLKLPEAQGCDQCSHLGFNGRTAIYEIVPIDEPMRRLIHGNAAEFELENHARQYSGSIRDDGLRKVLSGK TTLEEVLRVTNEASEA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 9e-136 | 59 |
gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-136 | 59 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
gspE | YP_002318121.1 | general secretory pathway protein E | VFG0182 | Protein | 6e-144 | 65 |
gspE | YP_002318121.1 | general secretory pathway protein E | VFG2048 | Protein | 2e-135 | 59 |
gspE | YP_002318121.1 | general secretory pathway protein E | VFG1876 | Protein | 2e-129 | 56 |
gspE | YP_002318121.1 | general secretory pathway protein E | VFG0233 | Protein | 1e-86 | 49 |
gspE | YP_002318121.1 | general secretory pathway protein E | VFG2426 | Protein | 2e-76 | 48 |
gspE | YP_002318121.1 | general secretory pathway protein E | VFG1880 | Protein | 3e-82 | 42 |