Gene Information

Name : AB57_0551 (AB57_0551)
Accession : YP_002317955.1
Strain : Acinetobacter baumannii AB0057
Genome accession: NC_011586
Putative virulence/resistance : Resistance
Product : beta-lactamase OXA-23
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2602
EC number : -
Position : 585844 - 586665 bp
Length : 822 bp
Strand : +
Note : -

DNA sequence : 
ATGAATAAATATTTTACTTGCTATGTGGTTGCTTCTCTTTTTCTTTCTGGTTGTACGGTTCAGCATAATTTAATAAATGA
AACCCCGAGTCAGATTGTTCAAGGACATAATCAGGTGATTCATCAATACTTTGATGAAAAAAACACCTCAGGTGTGCTGG
TTATTCAAACAGATAAAAAAATTAATCTATATGGTAATGCTCTAAGCCGCGCAAATACAGAATATGTGCCAGCCTCTACA
TTTAAAATGTTGAATGCCCTGATCGGATTGGAGAACCAGAAAACGGATATTAATGAAATATTTAAATGGAAGGGCGAGAA
AAGGTCATTTACCGCTTGGGAAAAAGACATGACACTAGGAGAAGCCATGAAGCTTTCTGCAGTCCCAGTCTATCAGGAAC
TTGCGCGACGTATCGGTCTTGATCTCATGCAAAAAGAAGTAAAACGTATTGGTTTCGGTAATGCTGAAATTGGACAGCAG
GTTGATAATTTCTGGTTGGTAGGACCATTAAAGGTTACGCCTATTCAAGAGGTAGAGTTTGTTTCCCAATTAGCACATAC
ACAGCTTCCATTTAGTGAAAAAGTGCAGGCTAATGTAAAAAATATGCTTCTTTTAGAAGAGAGTAATGGCTACAAAATTT
TTGGAAAGACTGGTTGGGCAATGGATATAAAACCACAAGTGGGCTGGTTGACCGGCTGGGTTGAGCAGCCAGATGGAAAA
ATTGTCGCTTTTGCATTAAATATGGAAATGCGGTCAGAAATGCCGGCATCTATACGTAATGAATTATTGATGAAATCATT
AAAACAGCTGAATATTATTTAA

Protein sequence : 
MNKYFTCYVVASLFLSGCTVQHNLINETPSQIVQGHNQVIHQYFDEKNTSGVLVIQTDKKINLYGNALSRANTEYVPAST
FKMLNALIGLENQKTDINEIFKWKGEKRSFTAWEKDMTLGEAMKLSAVPVYQELARRIGLDLMQKEVKRIGFGNAEIGQQ
VDNFWLVGPLKVTPIQEVEFVSQLAHTQLPFSEKVQANVKNMLLLEESNGYKIFGKTGWAMDIKPQVGWLTGWVEQPDGK
IVAFALNMEMRSEMPASIRNELLMKSLKQLNII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oxa-23 AFV47968.1 class D beta-lactamase OXA-23 Not tested AbaR25 Protein 1e-126 100
oxa-23 AFV47996.1 class D beta-lactamase OXA-23 Not tested delta-AbaR25 Protein 1e-126 100
BJAB0715_00989 YP_008216137.1 Beta-lactamase class D Not tested AbaR27 Protein 1e-126 100
oxa23 AEO37447.1 class D beta-lactamase OXA-23 Not tested AbaR4 Protein 1e-126 100
bla(Oxa-23) AFH57213.1 carbapenemase Not tested AbaR4b Protein 1e-126 100
oxa23 AEZ06035.1 OXA-23 class D beta-lactamase Not tested Tn6167 Protein 4e-126 99
oxa-Ab ADK35783.1 carbapenem-hydrolyzing oxacillinase OXA-69 Not tested AbaR8 Protein 2e-80 58
oxa-Ab ACV89830.1 carbapenem-hydrolyzing oxacillinase OXA-69 Not tested AbaR6 Protein 2e-80 58
oxa-Ab ACV89832.1 carbapenem-hydrolyzing oxacillinase OXA-69 Not tested AbaR7 Protein 2e-80 58

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AY795964.gene.p01 Protein 7e-127 100
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 NC_011586.7044972.p0 Protein 7e-127 100
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HM488992.1.gene1.p1 Protein 1e-126 99
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HM488988.1.gene1.p1 Protein 1e-126 99
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 FJ194494.1.gene1.p01 Protein 1e-125 99
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HM488989.1.gene1.p1 Protein 8e-127 99
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 JN638887.1.gene1.p01 Protein 2e-126 99
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HM488987.1.gene1.p1 Protein 1e-126 99
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AY762325.1.gene1.p01 Protein 1e-126 99
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AY288523.1.gene1.p01 Protein 4e-125 99
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HM488990.1.gene1.p1 Protein 9e-127 99
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HM488991.1.gene1.p1 Protein 2e-126 99
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HM488986.1.gene1.p1 Protein 7e-127 99
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AF201828.gene.p01 Protein 2e-126 99
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HQ122933.1.gene1.p01 Protein 6e-81 61
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EF534256.2.gene1.p01 Protein 5e-84 60
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AM991978.1.gene1.p01 Protein 4e-83 60
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AF509241.1.gene1.p01 Protein 1e-83 60
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 NC_012813.7996741.p0 Protein 1e-83 60
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 NC_013506.8571544.p0 Protein 1e-83 60
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AF201827.1.gene1.p01 Protein 1e-83 60
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AJ239129.2.gene1.p01 Protein 1e-83 60
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 NC_013277.8458023.p0 Protein 1e-83 60
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AF201826.1.gene1.p01 Protein 2e-82 59
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HM113558.1.gene1.p01 Protein 2e-81 59
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 DQ491200.1.gene1.p01 Protein 7e-80 59
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AY750913.1.gene1.p01 Protein 2e-80 59
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EU220744.1.gene1.p01 Protein 1e-78 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 JN215211.1.gene1.p01 Protein 1e-79 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 DQ519089.1.gene1.p01 Protein 3e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AJ309734.2.gene1.p01 Protein 5e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EF581285.1.gene1.p01 Protein 8e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HM113560.1.gene1.p01 Protein 2e-79 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AY750908.1.gene1.p01 Protein 2e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EU547445.1.gene1.p1 Protein 4e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AB634250.1.gene1.p01 Protein 9e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 DQ335566.1.gene1.p01 Protein 6e-79 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AY750909.1.gene1.p01 Protein 3e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HM113562.1.gene1.p01 Protein 1e-79 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 GQ853679.1.gene1.p1 Protein 1e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AY750907.1.gene1.p01 Protein 3e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HM570035.1.gene1.p01 Protein 8e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HQ425494.1.gene1.p01 Protein 4e-79 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AM231719.1.gene1.p01 Protein 2e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EF653400.1.gene1.p01 Protein 5e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EU019536.1.gene1.p01 Protein 6e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EF650035.1.gene1.p01 Protein 1e-79 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 NC_011595.7059224.p0 Protein 9e-81 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HM570036.1.gene1.p01 Protein 3e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 DQ309276.1.gene1.p01 Protein 2e-79 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AY750912.1.gene1.p01 Protein 4e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EU547446.1.gene1.p1 Protein 1e-79 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EU029998.1.gene2.p01 Protein 1e-78 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 DQ392963.1.gene1.p01 Protein 3e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 DQ385606.gene.p01 Protein 5e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 DQ888718.1.gene1.p01 Protein 2e-79 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EF650036.1.gene1.p01 Protein 2e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HM113561.1.gene1.p01 Protein 4e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EF650034.1.gene1.p01 Protein 9e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HM113564.1.gene1.p01 Protein 9e-79 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HM113559.1.gene1.p01 Protein 3e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HQ734813.1.gene1.p01 Protein 5e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HQ425492.1.gene1.p01 Protein 7e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EF650038.1.gene1.p01 Protein 1e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 DQ519086.1.gene2.p01 Protein 4e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EU019535.1.gene1.p01 Protein 4e-79 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AM279652.1.gene1.p01 Protein 2e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EF650037.1.gene1.p01 Protein 5e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HQ998857.1.gene1.p01 Protein 1e-79 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AY750911.1.gene1.p01 Protein 9e-81 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EF650032.1.gene1.p01 Protein 3e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HQ425495.1.gene1.p01 Protein 8e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HQ734812.1.gene1.p01 Protein 3e-79 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EF650033.1.gene1.p01 Protein 2e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EU547447.1.gene1.p1 Protein 4e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 DQ309277.1.gene1.p01 Protein 6e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 JN248564.1.gene1.p01 Protein 1e-79 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EU019534.1.gene1.p01 Protein 8e-81 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HQ734811.1.gene1.p01 Protein 3e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HM113563.1.gene1.p01 Protein 8e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 DQ519088.1.gene1.p01 Protein 2e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 DQ519087.1.gene1.p01 Protein 4e-80 58
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EU220745.1.gene1.p01 Protein 3e-78 57
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 JN603240.1.gene1.p1 Protein 5e-80 57
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AY750910.1.gene1.p01 Protein 8e-80 57
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AY862132.1.gene1.p01 Protein 8e-80 57
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 GQ853680.1.gene1.p1 Protein 1e-79 57
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EU375515.1.gene1.p1 Protein 9e-80 57
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 GQ853681.1.gene1.p1 Protein 7e-80 57
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 HQ425493.1.gene1.p01 Protein 2e-78 57
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 FJ872530.1.gene1.p01 Protein 2e-79 57
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AY665723.gene.p01 Protein 1e-65 51
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 EF102240.1.gene13.p0 Protein 2e-65 51
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 NC_010481.6155789.p0 Protein 1e-65 51
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 DQ519090.1.gene1.p01 Protein 2e-65 50
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 GU831575.1.gene1.p01 Protein 8e-65 50
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AY306130.1.gene1.p01 Protein 2e-47 45
AB57_0551 YP_002317955.1 beta-lactamase OXA-23 AY500137.1.gene1.p01 Protein 7e-41 41