Gene Information

Name : AB57_3570 (AB57_3570)
Accession : YP_002320869.1
Strain : Acinetobacter baumannii AB0057
Genome accession: NC_011586
Putative virulence/resistance : Resistance
Product : tetracycline resistance protein TetA
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2814
EC number : -
Position : 3676118 - 3677302 bp
Length : 1185 bp
Strand : -
Note : -

DNA sequence : 
ATGAATCGATCTCTATTTATTATCTTTGCAACTATTGCTTTAGATGCTATTGGTATCGGTCTTATTTTTCCGATTCTTCC
TTTATTATTACAAGATATGACGCATAGCACTCATATTTCTATATATATGGGTATATTGGCCAGTCTCTATGCGGCCATGC
AATTTATCTTCTCTCCTTTATTAGGTGCGTTAAGTGACAGATGGGGGCGTAGACCGGTCTTGCTTATTTCACTGGCTGGG
TCAGCAGTTAATTATCTCTTTCTAACTTTTTCACATAGCCTAATTTTATTGCTAGTAGGTCGCATTATTGCTGGAATCAC
CAGTGCCAACATGGCTGTTGCAAGTGCTTATATTGTCGATGTTTTGCACGAAAATAACCGCGCAAAATATTTTGGTTTAA
TCAATGCTATGTTTGGTGCAGGCTTCATTATTGGCCCTGTATTGGGCGGATTCTTGAGTGAATATGGATTAAGACTTCCT
TTCTTTGCGGCAGCTATATTGACAGGGCTTAATCTTTTATCTGCCTATTTTGTTTTGCCTGAATCCCGAAAAGTGACTTT
GGAGAACAAACAATTATCTACATTAAACCCTTTTAAAATATTTGCTGGTATTAGCTCTATTCGTGGTGTACTTCCACTTA
TTACGACCTTTTTTATCTTTAGTGCCATAGGGGAGGTATATGGAGTCTGCTGGGCATTATGGGGACATGACACATTTCAG
TGGAGCGGTTTCTGGGTAGGTCTTTCTCTAGGCGCATTTGGTCTATGTCAAATGCTGGTACAGGCTCTTATTCCGAGTCA
TGCTTCAAGATTGCTGGGTAATCGTAATGCTGTGCTGGCTGGTATTGCTTGTTCTTGTTTTGCTTTAGCAGTAATGGCTT
TCGCCCAAAGTGGTTGGATGATTTTTGCTATTATGCCTATTTTTGCGCTAGGGAGTATGGGGACACCTTCATTACAAGCC
TTAGCTTCTCAAAAGGTTTCTGCTGACCAGCAAGGACAGTTTCAGGGAGTGATAGCATCTACGGTAAGTATGGCCTCTAT
GATTGCCCCTATGTTTTTCTCCACTCTTTATTTTCAGTTTCAGGAAAAATGGCCGGGAGCAAATTGGTTGAGCGTGATTT
TGATTTACCTGCTCACCTTACCGATCATTTTGTATAGTACCCGACCAGTCGTACAACAAAGATAG

Protein sequence : 
MNRSLFIIFATIALDAIGIGLIFPILPLLLQDMTHSTHISIYMGILASLYAAMQFIFSPLLGALSDRWGRRPVLLISLAG
SAVNYLFLTFSHSLILLLVGRIIAGITSANMAVASAYIVDVLHENNRAKYFGLINAMFGAGFIIGPVLGGFLSEYGLRLP
FFAAAILTGLNLLSAYFVLPESRKVTLENKQLSTLNPFKIFAGISSIRGVLPLITTFFIFSAIGEVYGVCWALWGHDTFQ
WSGFWVGLSLGAFGLCQMLVQALIPSHASRLLGNRNAVLAGIACSCFALAVMAFAQSGWMIFAIMPIFALGSMGTPSLQA
LASQKVSADQQGQFQGVIASTVSMASMIAPMFFSTLYFQFQEKWPGANWLSVILIYLLTLPIILYSTRPVVQQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetA YP_006098396.1 tetracycline resistance protein Not tested Tn2411 Protein 6e-61 45
tetA(A) ACK44537.1 TetA(A) Not tested SGI1 Protein 5e-61 45
tetA(A) AGK07027.1 TetA(A) Not tested SGI1 Protein 5e-61 45
tetA(A) AGK07085.1 TetA(A) Not tested SGI1 Protein 5e-61 45
tetA(A) ACN81011.1 TetA(A) Not tested AbaR5 Protein 4e-61 45
tetA CAJ77066.1 Tetracycline resistance protein Not tested AbaR1 Protein 3e-61 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AB57_3570 YP_002320869.1 tetracycline resistance protein TetA NC_011586.7043399.p0 Protein 1e-163 100
AB57_3570 YP_002320869.1 tetracycline resistance protein TetA NC_011595.7059241.p0 Protein 3e-163 99
AB57_3570 YP_002320869.1 tetracycline resistance protein TetA NC_010410.6003291.p0 Protein 4e-163 99
AB57_3570 YP_002320869.1 tetracycline resistance protein TetA NC_009085.4918440.p0 Protein 1e-150 95
AB57_3570 YP_002320869.1 tetracycline resistance protein TetA AY264780.2.gene3.p01 Protein 5e-69 46
AB57_3570 YP_002320869.1 tetracycline resistance protein TetA AF090987.gene.p01 Protein 5e-61 46
AB57_3570 YP_002320869.1 tetracycline resistance protein TetA CP001485.1.gene2821. Protein 2e-61 45
AB57_3570 YP_002320869.1 tetracycline resistance protein TetA AF534183.gene.p01 Protein 2e-61 45
AB57_3570 YP_002320869.1 tetracycline resistance protein TetA NC_010410.6002597.p0 Protein 2e-61 45
AB57_3570 YP_002320869.1 tetracycline resistance protein TetA Y19114.gene.p01 Protein 7e-61 44
AB57_3570 YP_002320869.1 tetracycline resistance protein TetA X75761.gene.p01 Protein 1e-59 44
AB57_3570 YP_002320869.1 tetracycline resistance protein TetA AY743590.gene.p01 Protein 2e-64 43
AB57_3570 YP_002320869.1 tetracycline resistance protein TetA NC_011586.7045189.p0 Protein 2e-58 43
AB57_3570 YP_002320869.1 tetracycline resistance protein TetA AF133139.gene.p01 Protein 7e-53 41