Gene Information

Name : AB57_0290 (AB57_0290)
Accession : YP_002317699.1
Strain : Acinetobacter baumannii AB0057
Genome accession: NC_011586
Putative virulence/resistance : Unknown
Product : IntI1 integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 311597 - 312631 bp
Length : 1035 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAACCGCCACTGCGCCGTTACCACCGCTGCGTTCGGTCAAGGTTCTGGACCAGTTGCGTGAGCGCATACGCTACTT
GCATTACAGTTTACGAACCGAACAGGCTTATGTCAACTGGGTTCGTGCCTTCATCCGTTTCCACGGTGTGCGTCACCCGG
CAACCTTGGGCAGCAGCGAAGTCGAGGCATTTCTGTCCTGGCTGGCGAACGAGCGCAAGGTTTCGGTCTCCACGCATCGT
CAGGCATTGGCGGCCTTGCTGTTCTTCTACGGCAAGGTGCTGTGCACGGATCTGCCCTGGCTTCAGGAGATCGGAAGACC
TCGGCCGTCGCGGCGCTTGCCGGTGGTGCTGACCCCGGATGAAGTGGTTCGCATCCTCGGTTTTCTGGAAGGCGAGCATC
GTTTGTTCGCCCAGCTTCTGTATGGAACGGGCATGCGGATCAGTGAGGGTTTGCAACTGCGGGTCAAGGATCTGGATTTC
GATCACGGCACGATCATCGTGCGGGAGGGCAAGGGCTCCAAGGATCGGGCCTTGATGTTACCCGAGAGCTTGGCACCCAG
CCTGCGCGAGCAGCTGTCGCGTGCACGGGCATGGTGGCTGAAGGACCAGGCCGAGGGCCGCAGCGGCGTTGCGCTTCCCG
ACGCCCTTGAGCGGAAGTATCCGCGCGCCGGGCATTCCTGGCCGTGGTTCTGGGTTTTTGCGCAGCACACGCATTCGACC
GATCCACGGAGCGGTGTCGTGCGTCGCCATCACATGTATGACCAGACCTTTCAGCGCGCCTTCAAACGTGCCGTAGAACA
AGCAGGCATCACGAAGCCCGCCACACCGCACACCCTCCGCCACTCGTTCGCGACGGCCTTGCTCCGCAGCGGTTACGACA
TTCGAACCGTGCAGGATCTGCTCGGCCATTCCGACGTCTCTACGACGATGATTTACACGCATGTGCTGAAAGTTGGCGGT
GCCGCATCGAACGGCCGGTTGCGGAAAGTCCTCCCTGCGTCCGCTGATGGCCGGCAGCAGCCCGTCGTTGCCTGA

Protein sequence : 
MKTATAPLPPLRSVKVLDQLRERIRYLHYSLRTEQAYVNWVRAFIRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHR
QALAALLFFYGKVLCTDLPWLQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDF
DHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTHST
DPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTMIYTHVLKVGG
AASNGRLRKVLPASADGRQQPVVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
intI1 AGK36642.1 IntI1 integrase Not tested AbaR26 Protein 8e-145 97
intI1 ABB48427.1 IntI1 integrase Not tested SGI1 Protein 8e-145 97
intI YP_001844881.1 integrase Not tested AbaR20 Protein 1e-144 97
intI CAJ77082.1 Integrase Not tested AbaR1 Protein 8e-145 97
intI1 YP_005797130.1 integrase Not tested AbaR4e Protein 1e-144 97
intI1 AGF35060.1 IntI1 integrase Not tested SGI1 Protein 8e-145 97
intI1 YP_005797145.1 integrase Not tested AbaR4e Protein 1e-144 97
intI1 AGK06930.1 IntI1 integrase Not tested SGI1 Protein 8e-145 97
intI1 ACN81019.1 IntI1 integrase Not tested AbaR5 Protein 1e-144 97
intI1 AGK06967.1 IntI1 integrase Not tested SGI1 Protein 8e-145 97
intI1 AGK07013.1 IntI1 integrase Not tested SGI1 Protein 8e-145 97
intI1 AGK07071.1 IntI1 integrase Not tested SGI1 Protein 8e-145 97
intI1 AFV53119.1 IntI1 integrase Not tested AbGRI2-1 Protein 8e-145 97
intI CAJ77028.1 Integrase Not tested AbaR1 Protein 4e-144 96
intI1 ACY75520.1 integrase Not tested Tn6060 Protein 4e-144 96
intI1 ACY75535.1 integrase Not tested Tn6060 Protein 4e-144 96
intI1 AGF34986.1 IntI1 integrase Not tested SGI1 Protein 4e-144 96
intI1 AGF35026.1 IntI1 integrase Not tested SGI1 Protein 4e-144 96
intI1 CAB46685.1 DNA integrase Not tested Not named Protein 4e-144 96
unnamed AAL08437.1 Tn21 integrase IntI1 Not tested SRL Protein 3e-143 96
unnamed ACF06155.1 class 1 integrase Not tested Tn5036-like Protein 1e-144 96
intI1 AAK02045.1 integrase Not tested SGI1 Protein 4e-144 96
intI1 AGK07098.1 IntI1 integrase Not tested SGI1 Protein 1e-144 96
intI1 ABZ01842.1 IntI1 Not tested SGI2 Protein 4e-144 96
EC042_4092 YP_006098375.1 integrase Not tested Tn2411 Protein 1e-144 96
intI1 AFL65913.1 class 1 integrase Not tested SGI1-J6 Protein 3e-107 95
int1 YP_005160012.1 integrase Not tested Not named Protein 6e-116 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AB57_0290 YP_002317699.1 IntI1 integrase VFG1028 Protein 1e-143 96