Gene Information

Name : dnaB (AB57_2512)
Accession : YP_002319857.1
Strain : Acinetobacter baumannii AB0057
Genome accession: NC_011586
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : 3.6.1.-
Position : 2605611 - 2607056 bp
Length : 1446 bp
Strand : +
Note : -

DNA sequence :
ATGTCTCAGGCGAATGCCACTTCTTTAACCCTTTCATCTCCAACAGAAAATAAGACGAGTGAATCAGGCCAACTTAAAGA
GTTTCGCACTCCCCCACACAATTTAGCCATTGAGCAAGCTGTACTTGCTGCGCTGATGACCGTTGCTGAATCTTTTGAAC
AAGTCAGTGACTTACTCAAAGAAAATGATTTTTATGCCACTCGTCATAAATATATTTATCGTGCAATTGAAAAATTAGCA
CAGGAAAACTCACCGTATGATGCGGTTTTGGTCAACGACTGGCTTTTAAAACAAAATTTACTCGATGCGATTGGCGGTGA
AGAATATTTGATGCAGCTTATGGCTGACTCACCTTCGAGTTTCTATAATCTTGAAACTTATGCGACTAAAATTAAAGAAT
TTTCTACACTACGCAGTATGATTAAGGTAAGTACTGAAATTTTACAAAATGCTTACGACACAAAAGGTCGAGGTGTAAGT
GAAATTTTAGATTTAGCCGAAACGAGTATTTTCTCTTTAGCAGAACAACATAACAACAATAAAAAAGATTCTGGACCTAA
AGCAATTAGTTCTGTAACTGCCGATGTAATTAGTAAACTTGATGAACTTTCAAAATTAGACGGAAATATTACTGGTTTAA
CGACTGGCTTCTTAGAGCTCGATAATAAAACCTCTGGTATGCAACCAGGTGATTTGATTATTGTCGCAGCACGTCCATCT
ATGGGTAAAACTACTTTCGCCATGAACTTGGTTGAAAGTGTTTTGCAATACAATAAACTCCCAGCTCTCGTCTTCTCTAT
GGAGATGCCAGCAGACTCTATTGCGATGCGTCTCATTTCAGCTATGGGTAAAGTGCATCAAGGGCATTTACGTTCAGGTA
ATTTGGATGCTGATGAATGGACTAAAGTAACGGGTACCATTCTGCAACTTCAACAAATGCATTTGTATATTGATGATTCC
TCTGCCCTACCACCTACTGAAGTTCGTGCGCGAGCTAGACGTATCGCAAAAATGCATGACGGTAAAATCGGCTGTATCAT
GGTCGACTATTTACAGTTGATGAAAGTTCCGGGCATGGGTGACAACCGTGTTGGTGAGATCTCGGAAATTTCACGTAGCT
TAAAAGCTTTAGCTAAAGAAATGAACTGTCCTGTGATTGCACTATCTCAGCTTAACCGAAGTCTGGAAAACCGACCGAAT
AAACGTCCAGTAATGTCTGACTTACGTGAATCTGGTGCGATTGAACAGGATGCCGACTTAATCATGTTTATTTACCGTGA
TGAAGTCTATAACAAAGAATCGAAAGAAGCAGGCACCGCAGAAATTATCATCGGTAAACAGCGTAATGGTCCAATCGGTA
CTGTTCGCCTTGCCTTTGAAGGCCAATATACTCGTTTTAGTAATCTCTCTCCTGAGTATTACAGCCAATATGATGATGAA
GAATAA

Protein sequence :
MSQANATSLTLSSPTENKTSESGQLKEFRTPPHNLAIEQAVLAALMTVAESFEQVSDLLKENDFYATRHKYIYRAIEKLA
QENSPYDAVLVNDWLLKQNLLDAIGGEEYLMQLMADSPSSFYNLETYATKIKEFSTLRSMIKVSTEILQNAYDTKGRGVS
EILDLAETSIFSLAEQHNNNKKDSGPKAISSVTADVISKLDELSKLDGNITGLTTGFLELDNKTSGMQPGDLIIVAARPS
MGKTTFAMNLVESVLQYNKLPALVFSMEMPADSIAMRLISAMGKVHQGHLRSGNLDADEWTKVTGTILQLQQMHLYIDDS
SALPPTEVRARARRIAKMHDGKIGCIMVDYLQLMKVPGMGDNRVGEISEISRSLKALAKEMNCPVIALSQLNRSLENRPN
KRPVMSDLRESGAIEQDADLIMFIYRDEVYNKESKEAGTAEIIIGKQRNGPIGTVRLAFEGQYTRFSNLSPEYYSQYDDE
E

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 5e-77 46
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 9e-88 45
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 4e-80 43
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 4e-80 43
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 8e-78 43
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 8e-84 42
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 5e-84 42
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 4e-84 42