Gene Information

Name : kdpB (AB57_2473)
Accession : YP_002319820.1
Strain : Acinetobacter baumannii AB0057
Genome accession: NC_011586
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2216
EC number : 3.6.3.12
Position : 2566408 - 2568441 bp
Length : 2034 bp
Strand : -
Note : One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions

DNA sequence :
ATGAATACACAAACTCATGTAAATAGCCATAAACAAACCATGGCAGTGCCAAATTTTGAAGTTTGGAAAAATGCATTTGT
GAAACTGCTACCACAGCATGCAATTAAAAACCCTGTGATGGCAATTGTATGGCTTGGAACAGTGGTTACAGGCATTAGTA
CAATCTTAGGTTACACCACGCTGATATTTGGTTTAATGGTTACAGCAATTCTGTTTATTACCATTTTATTTGCTAACTAT
GCCGAGGCTGTTGCAGAGGCTAGAGGCCGTGGGCAGGCATCTTCATTACGTGCAGCAAGAGAAAATTTAACGGCTCGAAG
ACTCAACTCTTTGACAGACCGTCAAGCGACTCAAGTTGCAGCGACCGAACTTCATTTAAATGATTTTATTGAAGTACATG
CAGGTGAGCTTGTTCCAGCCGACGGTGAGATTGTAGAAGGCTTTGCAACTATTAATGAATCGGCTGTTACAGGTGAGTCA
GCACCTGTGCTACGTGAAGCTGGAACAGACCGTTCAGGTGTTATTGGTGGAACCAAAGTACTTACAGATCGTATTGTTGT
GCAAGTGACTGCTGAATCTGGTCAAAGTTTCTTAGACCGTATGATTGCTTTGGTCGAAGGTTCAAATCGTCAAAAAACAC
CGAATGAGATTGCGCTTGGCTTCTTGTTAATGGTGATGACAATCACGTTTTTAATTGTTGTGATTAGCTTGCCATTTATT
GCCAAGTATTTGCATATTGAACTTGATCCAGTTGTGCTCGTGGCGTTATTGGTCTGCTTAATTCCAACAACCATTGGTGG
CTTGTTACCTGCGATTGGTATTGCGGGGATGAACCGTGCACTCAAGGCCAATGTTTTGGCGAAATCGGGGAAAGCAGTAG
AAGTCGCGGGTGACATTGATGTGCTTTTACTCGATAAAACAGGAACCATTACTTATGGTGACCGTCAAGCGACCTCTTTT
TATCCTTTAACTTCGGTAACCGAGTCAGAGTTGAGAGCTGCTGCTTGGATAAGTTCACTTGCCGACCCAACACCAGAAGG
GAAATCAATTGTTAAGTTAGCAAAAGAGCAAGGTCTAAAACAGCAAGAACCTGAGCAAGCCGAATTTATCTCTTTTAGTG
CTTCGACTCGAATTTCTGGCGTGAATTTACCGAATGGTGACCAAATTCGTAAAGGTGCATTAGATGCAATCTTGAAGTTT
GTAAATGAAGATTATTCTCAAGATTTAGAGTTAAAAGCACGTGTTGAGCAAGTTGCCAAAAAAGGAGCAACTCCTTTAGT
CGTCGCTAATCAACATCATGTGTTGGGTGTGATTGAACTCTCAGATGTGATTAAACACGGCATTAAAGAACGTTTTGCTC
GTTTGAGAGAAATGGGTATCAGAACCGTCATGGTTACAGGTGATAACCCATTAACTGCGGCCGCGATTGCTGCTGAAGCG
GGTGTAGATGACTATATTGCCGAAGCAAAACCAGAAGACAAATTGGCCTGTATTCGCACCGAACAACAACAAGGTCGTTT
AGTTGCAATGGTCGGTGACGGAACCAACGATGCGCCGGCATTAGCACAAGCTGATATTGGTCTAGCCATGAACTCGGGTA
CACAAGCTGCAAAAGAAGCCGGCAACATGGTTGATTTAGACTCAGATCCAACCAAACTACTTGCTGTGGTCGAGATTGGG
AAACAGCAGTTGATTACCCGTGGCGCTTTAACAACATTTTCGTTAGCAAACGACGTCTCTAAATACTTTGCCATTTTACC
TGCATTGTTCGCTGCTGCGATTCCACAAATGCAAGTATTGAATGTAATGCACTTAGCAAGTCCAAACAGCGCGATTTTAT
CTGCATTAATTTTTAACGCGATTATTATTCCGCTATTAATTCCAATCGCACTCCGAGGCGCGAAATTTAAACCTTCAACT
GCAACTCAGTTACTACGTCGAAATATGTTGATTTATGGGGTGGGCGGTGTGGTTCTACCATTCATTGCCATTAAAGCGAT
TGATGTAGTAATTGTTCAATTATTTGGTTTGTAA

Protein sequence :
MNTQTHVNSHKQTMAVPNFEVWKNAFVKLLPQHAIKNPVMAIVWLGTVVTGISTILGYTTLIFGLMVTAILFITILFANY
AEAVAEARGRGQASSLRAARENLTARRLNSLTDRQATQVAATELHLNDFIEVHAGELVPADGEIVEGFATINESAVTGES
APVLREAGTDRSGVIGGTKVLTDRIVVQVTAESGQSFLDRMIALVEGSNRQKTPNEIALGFLLMVMTITFLIVVISLPFI
AKYLHIELDPVVLVALLVCLIPTTIGGLLPAIGIAGMNRALKANVLAKSGKAVEVAGDIDVLLLDKTGTITYGDRQATSF
YPLTSVTESELRAAAWISSLADPTPEGKSIVKLAKEQGLKQQEPEQAEFISFSASTRISGVNLPNGDQIRKGALDAILKF
VNEDYSQDLELKARVEQVAKKGATPLVVANQHHVLGVIELSDVIKHGIKERFARLREMGIRTVMVTGDNPLTAAAIAAEA
GVDDYIAEAKPEDKLACIRTEQQQGRLVAMVGDGTNDAPALAQADIGLAMNSGTQAAKEAGNMVDLDSDPTKLLAVVEIG
KQQLITRGALTTFSLANDVSKYFAILPALFAAAIPQMQVLNVMHLASPNSAILSALIFNAIIIPLLIPIALRGAKFKPST
ATQLLRRNMLIYGVGGVVLPFIAIKAIDVVIVQLFGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-136 55
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-136 55
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-136 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-136 55
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 1e-136 55
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 1e-136 55
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 3e-142 55
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 4e-142 55