Gene Information

Name : fliI (Aflv_1738)
Accession : YP_002316084.1
Strain : Anoxybacillus flavithermus WK1
Genome accession: NC_011567
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 1728178 - 1729491 bp
Length : 1314 bp
Strand : -
Note : involved in type III protein export during flagellum assembly

DNA sequence :
ATGAACTGGCAAGCACTCATCAATGAAATTGAGTTGCTCGACCCATATAAACGATTTGGCAAAGTCACACGCGTGATCGG
TTTAATGATCGAAGCAAAAGGCCCGGAAAGTTCAATTGGCGATGTGTGCTACATTCATATCGGCCACAAAAAAAAGAAAA
AAATTCAAGCGGAAGTCGTCGGCTTTCGTGATGAATATGTACTTTTAATGCCGTATGCAACCGTTCAAGATATCGCCCCG
GGTTGCATTGTAGAAGCAACGGGGGGGCCGCTTGAAATGAAAGTCGGTTCAGCGCTCGTTGGGCGTGTTATTGACGCATT
AGGCGCCCCGCTTGACGATCAACCGTTTCCGAAAGGATTGACGGCTGTTCCAATCGATCGCCAACCGCCCAATCCGATGA
CGCGTCCTCCGATTTCTGAGCCGATTGAAGTCGGGGTAAAAATGATTGACAGCTTATTGACGGTTGGCAAAGGACAACGC
GTCGGCATTTTTGCCGGTTCTGGCGTCGGGAAAAGTACGTTAATGGGGATGATTGCACGCAATACAAATGCAGATTTAAA
CGTGATCGCACTTATCGGTGAACGCGGACGCGAAGTGAGGGAGTTTATTGAACGCGATCTCGGTCCAGAAGGATTAAAAC
GTTCGATTGTCATTGTTGCGACGTCCGATCAACCAGCGCTCATGCGCATTAAAGGGGCGTATACAGCGACAGCGATTGCC
GAATATTTTCGCGACCAAGGACTAAACGTCATGTTTATGATGGATTCCGTCACGCGCGTGGCGATGGCGCAACGTGAAGT
TGGATTAGCTGTCGGCGAGCCACCGACAACGAAAGGATATACGCCGTCCGTTTTTGCCATTTTGCCAAAACTACTTGAAC
GGACAGGAACGAATGAACATGGAACGATTACTGCTTTTTATACGGTGCTCGTTGACGGCGATGATATGAATGAGCCGATT
GCTGATACGGTTCGAGGGATTTTAGATGGCCACTTTGTATTAGAACGTCAACTAGCCAATAAAGGTCAATATCCAGCGAT
TAACGTATTAAAAAGTGTAAGTCGAGTCATGAACTACATTGTGACGCCAGAGCATCGAAAAGTGGCAGAAAAATTGCGTG
AGTTGTTAGCCACATATGTGCAGTCTGAAGATTTAATTCAAATCGGTGCGTATAAACGAGGATCGTCGCGAGAAATTGAC
GAAGCGATCCGTTATTATCCGAAAATTATTTCATTTTTAAAACAAGATGTTCATGAGTGTTACACAATAAACGAAAGTGT
TCAACAGTTGTTTCAACTTATTGAACAAGGGTGA

Protein sequence :
MNWQALINEIELLDPYKRFGKVTRVIGLMIEAKGPESSIGDVCYIHIGHKKKKKIQAEVVGFRDEYVLLMPYATVQDIAP
GCIVEATGGPLEMKVGSALVGRVIDALGAPLDDQPFPKGLTAVPIDRQPPNPMTRPPISEPIEVGVKMIDSLLTVGKGQR
VGIFAGSGVGKSTLMGMIARNTNADLNVIALIGERGREVREFIERDLGPEGLKRSIVIVATSDQPALMRIKGAYTATAIA
EYFRDQGLNVMFMMDSVTRVAMAQREVGLAVGEPPTTKGYTPSVFAILPKLLERTGTNEHGTITAFYTVLVDGDDMNEPI
ADTVRGILDGHFVLERQLANKGQYPAINVLKSVSRVMNYIVTPEHRKVAEKLRELLATYVQSEDLIQIGAYKRGSSREID
EAIRYYPKIISFLKQDVHECYTINESVQQLFQLIEQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 6e-102 52
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-102 52
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 6e-102 52
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-99 52
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-99 52
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-101 52
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 3e-102 51
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-100 51
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 2e-100 51
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-97 51
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 7e-90 50
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-88 48
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-88 48
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 8e-89 48
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-88 48
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 7e-88 48
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-82 48
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-82 48
unnamed AAL06369.1 EscN Virulence LEE Protein 1e-83 46
escN AAC31513.1 L0034 Virulence LEE Protein 3e-83 46
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 3e-83 46
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 7e-83 46
escN CAI43874.1 EscN protein Virulence LEE Protein 2e-83 46
escN NP_290268.1 hypothetical protein Virulence LEE Protein 3e-83 46
escN AAC38383.1 EscN Virulence LEE Protein 2e-83 46
ECs4568 NP_312595.1 EscN Virulence LEE Protein 3e-83 46
escN YP_003223475.1 translocator EscN Virulence LEE Protein 3e-83 46
escN YP_003236088.1 translocator EscN Virulence LEE Protein 5e-84 46
escN AAK26715.1 EscN Virulence LEE Protein 1e-82 45
escN AAL57542.1 EscN Virulence LEE Protein 1e-82 45
escN CAC81862.1 EscN protein Virulence LEE II Protein 6e-83 45
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 8e-73 45
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 1e-78 44
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 4e-74 42
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-75 42
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 3e-76 42
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 1e-76 42
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-76 42
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 2e-77 41
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-77 41
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 5e-68 41
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 2e-82 41
invC AAS66861.1 InvC Not tested SSR-2 Protein 5e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_002316084.1 flagellum-specific ATP synthase VFG2144 Protein 5e-107 54
fliI YP_002316084.1 flagellum-specific ATP synthase VFG0192 Protein 7e-98 51
fliI YP_002316084.1 flagellum-specific ATP synthase VFG0048 Protein 4e-97 51
fliI YP_002316084.1 flagellum-specific ATP synthase VFG0390 Protein 9e-99 50
fliI YP_002316084.1 flagellum-specific ATP synthase VFG1254 Protein 8e-96 50
fliI YP_002316084.1 flagellum-specific ATP synthase VFG0515 Protein 8e-89 48
fliI YP_002316084.1 flagellum-specific ATP synthase VFG2331 Protein 3e-89 48
fliI YP_002316084.1 flagellum-specific ATP synthase VFG2499 Protein 3e-92 47
fliI YP_002316084.1 flagellum-specific ATP synthase VFG0730 Protein 1e-83 46
fliI YP_002316084.1 flagellum-specific ATP synthase VFG0812 Protein 1e-83 46
fliI YP_002316084.1 flagellum-specific ATP synthase VFG1008 Protein 5e-70 43
fliI YP_002316084.1 flagellum-specific ATP synthase VFG2459 Protein 6e-73 42
fliI YP_002316084.1 flagellum-specific ATP synthase VFG1778 Protein 2e-70 41