Gene Information

Name : pdxS (Aflv_0011)
Accession : YP_002314380.1
Strain : Anoxybacillus flavithermus WK1
Genome accession: NC_011567
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 19816 - 20700 bp
Length : 885 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
GTGGCGGTTACAGGTACAGAACGTGTAAAACGCGGAATGGCGGAAATGCAAAAAGGTGGCGTCATTATGGACGTCGTGAA
TGCAGAACAAGCGAAAATCGCAGAAGCAGCAGGTGCTGTTGCAGTGATGGCTCTTGAGCGCGTTCCAGCTGATATTCGTG
CAGCTGGTGGCGTTGCCCGCATGGCTGATCCGACAGTTATTGAAGAAGTGATGAAAGCAGTATCTATTCCGGTGATGGCG
AAGGCGCGTATCGGTCACTATGTGGAAGCGCGCGTATTAGAGGCGCTCGGCGTAGACTATATTGATGAGAGTGAAGTATT
AACGCCAGCAGACGAAGAATTTCATATTGATAAACGTCAATTTACTGTGCCATTTGTATGTGGTTGCCGTGATTTAGGTG
AAGCAGCTCGTCGTATTGCCGAAGGTGCCTCTATGCTTCGTACGAAAGGTGAGCCGGGCACAGGGAATATTGTTGAAGCA
GTTCGCCATATGCGTAAAGTAAACGCGCAAGTGCGTAAAGTCGTCAGCATGAGCGAAGACGAATTAATGACAGAAGCGAA
AAATTTAGGTGCTCCGTTTGAAGTATTATTGGAAATCAAACGTCTCGGTCGCCTTCCTGTCGTTAACTTTGCAGCAGGTG
GTGTCGCGACACCAGCCGATGCAGCGTTGATGATGCATTTAGGTGCTGATGGTGTATTTGTTGGTTCTGGTATTTTCAAA
TCAGAAAACCCTGAAAAATATGCACGTGCTATCGTAGAGGCGACAACTCATTATGAAGATTACGAATTAATTGCCCACTT
ATCAAAAGGATTAGGTGGAGCGATGAAAGGGATTGATATTTCTTCGTTGCTTCCTGAACAACGAATGCAAGAACGTGGAT
GGTAA

Protein sequence :
MAVTGTERVKRGMAEMQKGGVIMDVVNAEQAKIAEAAGAVAVMALERVPADIRAAGGVARMADPTVIEEVMKAVSIPVMA
KARIGHYVEARVLEALGVDYIDESEVLTPADEEFHIDKRQFTVPFVCGCRDLGEAARRIAEGASMLRTKGEPGTGNIVEA
VRHMRKVNAQVRKVVSMSEDELMTEAKNLGAPFEVLLEIKRLGRLPVVNFAAGGVATPADAALMMHLGADGVFVGSGIFK
SENPEKYARAIVEATTHYEDYELIAHLSKGLGGAMKGIDISSLLPEQRMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-74 64
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-74 64
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-74 64