Gene Information

Name : ribD (Aflv_1015)
Accession : YP_002315376.1
Strain : Anoxybacillus flavithermus WK1
Genome accession: NC_011567
Putative virulence/resistance : Unknown
Product : riboflavin-specific pyrimidine reductase/deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : -
Position : 1017795 - 1018871 bp
Length : 1077 bp
Strand : +
Note : -

DNA sequence :
ATGGACGAACAATATATGCGTTTCGCATTACAATTAGCGCAATCAGCACGTGGACAGACGTCACCGAACCCGCTTGTTGG
GGCTGTTGTTGTAAAACATGGTGAAATTGTCGGCTTTGGTGCACACTTAAAAGCAGGAGAGCCACATGCAGAAGTACACG
CTTTGCGCATGGCGGGCGAGAAAGCGGAAGGAGCAACCGTTTACGTCACGCTTGAACCTTGCAGTCATTATGGAAGAACG
CCCCCTTGCGCTGATTTATTAATTGAAAAAAAGGTGAAGCGCGTCGTTGTGGCGACAACGGACCCAAATCCGCTCGTGGC
AGGAAAAGGCATTGAAAAATTAAAGCGAGCAGGAATTGACGTCACCGTCGGAGTGTTGAAAGAAGAGGCGGATGCGTTAA
ACGAAATGTTTTTTCATTATATTTCAACAAAAACGCCGTATGTGACGTTAAAGTATGCGATGAGCTTAGATGGGAAAATT
GCAACAAAAACGGGCGAAAGCAAGTGGATTACGTCGGAAGATGCGCGGCGTGACGTGCATCGCGAGCGACGTATGCACGA
TGCGATCGTTGTCGGTGTCGGCACAATTTTAGCAGATGATCCAAGCTTAACCGTTCGTTTTGGGTATGAAGGAAAACAAC
CAATCCGAATCGTTCTCGATACACATTTACGTACACCGCTTCACGCGAATGTCGTCACAGATCAAAAGGCGCCAACATGG
ATCGTCGTCGGCCAACATGTGACAGAGGAGCAAATAAAGCCATACGAACATGCCGGCGTACACATCATTCGTATGAATGA
AAATAAAATTGATATTCCATTTCTTTTACATGAACTTGGCAAACGGAACGTCATGTCCATATTTGTTGAAGGTGGAGCGC
ATGTGCACGGTAGTTTTCTACATTCTCGTTCCGTTCAACAAGTGATTGCGTATATCGCACCGATGTTGATTGGGGGGAAT
GAAGCTCCTTCTGCCATCGGTGGAGAAGGGTTTGGACGAATGATGGATGCGCTCCGTTTACAAGTGAAACATGTCGAAAG
GATCGGATCAGATATAAAAATCGTTGCTAAAGGATGA

Protein sequence :
MDEQYMRFALQLAQSARGQTSPNPLVGAVVVKHGEIVGFGAHLKAGEPHAEVHALRMAGEKAEGATVYVTLEPCSHYGRT
PPCADLLIEKKVKRVVVATTDPNPLVAGKGIEKLKRAGIDVTVGVLKEEADALNEMFFHYISTKTPYVTLKYAMSLDGKI
ATKTGESKWITSEDARRDVHRERRMHDAIVVGVGTILADDPSLTVRFGYEGKQPIRIVLDTHLRTPLHANVVTDQKAPTW
IVVGQHVTEEQIKPYEHAGVHIIRMNENKIDIPFLLHELGKRNVMSIFVEGGAHVHGSFLHSRSVQQVIAYIAPMLIGGN
EAPSAIGGEGFGRMMDALRLQVKHVERIGSDIKIVAKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-56 43
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-56 43