Gene Information

Name : swp_1004 (swp_1004)
Accession : YP_002310394.1
Strain : Shewanella piezotolerans WP3
Genome accession: NC_011566
Putative virulence/resistance : Unknown
Product : Helicase:Type III restriction enzyme, res subunit
Function : -
COG functional category : K : Transcription
COG ID : COG1061
EC number : -
Position : 1008409 - 1009797 bp
Length : 1389 bp
Strand : -
Note : Helicase, C-terminal:Type III restriction enzyme, res subunit

DNA sequence :
GTGAAGTTAAGACAATGGCAGCATGATTGCGTTAAAAAGGCGCTAGAATCCTACCAAACACAAAACCATTTTATGTGTTT
AGCAACTCCTGGAGCGGGTAAGACTGTGATGGCAGCCGAGTTGGCAGCTAGATTAATCGCTATGGGGAAAGTAGATTTCG
TTTTATGTTTCTCACCCTCATCTGAAGTCAACGAAAGTATAAGAGCCAGCTTTTCACGACGACTACACAAGCGTTTTGAT
GGATTAATGGGAGCTATTGGAAGCGTTTACACTTATCAGTCCATGTCTTCATTAACCCCTGAGTTTTGGCAACTTCTTCA
TAGTCATAATGTCTTTGTCATTATGGATGAAGTGCATCACCTAAAAGGCACCGAACTCAATAATGCCAACGCATGGGGAG
AGGAAGTATTACTCAACATTCAAAACCAAGCTTGCTATACCTTAGCTTTATCTGGCACTCCATGGCGGTCTGATTCTGCA
CCAATCGTGCTTTCCAGATTTACTGAACCCGATAACACCATACATTGTGATTTTGTCTATGGCCTAAAACAAGCAGTAGC
CGATGACGTATGTCGTAAACCCAATATTGCACTCATTGATAATGATAAAATTAGATTAGATGATGAGCTAGAATCTGAAA
CGTTTTCATCGATAACCGAGTTATTAAAAGGGTCTGGATTCAGCTATAAAGCATTAATAAGTAATCACCAAGTGATGCAT
TACATGCTGAACCAAGGTATTAAAAAACTAGAACAAATACGGCAAGAAACCCCCTTCTCTGGCGGACTCATTGTTGCTTC
ATCAATCAAACATGCCAAACAGCTTTACCAAATTATTGTTGGAGATTTTAAACAAACTGCCTGTATTGTCACCTCTAAAT
TGAAGCATCCTTCACACACGATTGAAGCCTTTAGGCAGAGCGATACTCAATGGATTGTGAGTGTTGGTATGATCTCAGAA
GGGACAGATATTCCACGGCTGCAGGTATGTTGTCACCTGAGTCTCATCAAAACCGAAATGCATTATCGCCAGGTGTTAGG
TCGGATCTTGCGAGTCACTTCCTGTGATGCTCAACAAGCTTGGTTATTCACTTTAGCTGAAGCGAGCCTTATTGAATTTG
CTTATAGGATCGATCAAGATCTACCGGAAAACGCAGTGATTGTAGAACAAACTGAGCAACAAGAACTAAATTTGGCTTTA
CCTCATAAACCAATCTCGACTGAGTTTGATCATGACTTAAGCAGCAATCTACACTTCTCAGAAATATCACTAGCCACTAA
AGCAGCTACACCACCACTTCTAATCGATATTGAGGAAGAAAACAGTTACAACTTAGCCCTGTTAGGCGGATACAAGGAAC
AGATTGTGAGGATGTTTGATGCTCATTAA

Protein sequence :
MKLRQWQHDCVKKALESYQTQNHFMCLATPGAGKTVMAAELAARLIAMGKVDFVLCFSPSSEVNESIRASFSRRLHKRFD
GLMGAIGSVYTYQSMSSLTPEFWQLLHSHNVFVIMDEVHHLKGTELNNANAWGEEVLLNIQNQACYTLALSGTPWRSDSA
PIVLSRFTEPDNTIHCDFVYGLKQAVADDVCRKPNIALIDNDKIRLDDELESETFSSITELLKGSGFSYKALISNHQVMH
YMLNQGIKKLEQIRQETPFSGGLIVASSIKHAKQLYQIIVGDFKQTACIVTSKLKHPSHTIEAFRQSDTQWIVSVGMISE
GTDIPRLQVCCHLSLIKTEMHYRQVLGRILRVTSCDAQQAWLFTLAEASLIEFAYRIDQDLPENAVIVEQTEQQELNLAL
PHKPISTEFDHDLSSNLHFSEISLATKAATPPLLIDIEEENSYNLALLGGYKEQIVRMFDAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13515.1 type III restriction enzyme Not tested PAGI-7 Protein 3e-102 45