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Name : swp_5086 (swp_5086) Accession : YP_002314288.1 Strain : Shewanella piezotolerans WP3 Genome accession: NC_011566 Putative virulence/resistance : Virulence Product : Flagellar transport protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 5311250 - 5311978 bp Length : 729 bp Strand : - Note : - DNA sequence : ATGTGGCGAGTTTTGCTTCTGCTTCTTGTTGGCTTTTCCTCTAGTGCATACGCCAATGATGGTTTTACGCTATTTACATT AGGCGATGGAGCCCAAGCCCAATCAGTAAACGTGAAGTTAGAGATCTTGGCATTAATGACAGTGTTAAGCTTTTTACCTG CACTGTTAATGATGCTGACAAGCTTTACTCGCATCATAGTGGTATTAGCAATATTACGTCAGGCTTTGGGTTTGCAGCAG AGCCCACCAAACAAGGTATTGATCGGGATCGCGCTAGTGATGACCATTTTCATCATGCGGCCCGTGGGGCAAGCAATCTA TGACGAAGCCTTCTTACCATATGATCTAGGCCAAATCGAGTTAACCGAGGCCGTTGTTAAGGCGGAGGTACCACTACGAA AATTTATGCTGGCTCAAACTCGTGAGACTGATCTTGAACAGATGCTAAAAATAGCGGATGAGCCAACAACACTTACTGCC GATGAGATCCCATTTTTCGTATTGATGCCTGCATTTGTGTTGAGCGAGCTAAAAACAGCGTTTCAGATAGGTTTTTTACT TTTCCTGCCTTTTTTGGTGATCGATCTGGTTGTCGCCAGTGTGTTGATGTCGATGGGGATGATGATGCTTTCTCCTTTGA TTATCTCCTTGCCATTCAAGTTAATGGTTTTTGTACTGGTTGATGGCTGGTCAATGACAGTGAGCACCCTCGTGGCGAGT TATGGTTAG Protein sequence : MWRVLLLLLVGFSSSAYANDGFTLFTLGDGAQAQSVNVKLEILALMTVLSFLPALLMMLTSFTRIIVVLAILRQALGLQQ SPPNKVLIGIALVMTIFIMRPVGQAIYDEAFLPYDLGQIELTEAVVKAEVPLRKFMLAQTRETDLEQMLKIADEPTTLTA DEIPFFVLMPAFVLSELKTAFQIGFLLFLPFLVIDLVVASVLMSMGMMMLSPLIISLPFKLMVFVLVDGWSMTVSTLVAS YG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 7e-25 | 48 |
| hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 1e-26 | 45 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 3e-27 | 45 |
| hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 1e-26 | 44 |
| hrcR | NP_640757.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 3e-27 | 44 |
| hrcR | AAD21321.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-27 | 44 |
| hrcR | YP_362153.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 3e-27 | 44 |
| XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 1e-26 | 44 |
| hrcR | YP_198720.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 1e-26 | 44 |
| hrcR | AAT96262.1 | HrcR | Virulence | S-PAI | Protein | 1e-18 | 43 |
| hrcR | AAT96303.1 | HrcR | Virulence | S-PAI | Protein | 1e-18 | 43 |
| hrcR | AAT96343.1 | HrcR | Virulence | S-PAI | Protein | 1e-18 | 43 |
| escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 5e-21 | 43 |
| escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 5e-21 | 43 |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 4e-20 | 42 |
| escR | CAC81847.1 | EscR protein | Virulence | LEE II | Protein | 4e-20 | 41 |
| escR | CAI43889.1 | EscR protein | Virulence | LEE | Protein | 4e-20 | 41 |
| escR | YP_003223490.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 5e-20 | 41 |
| escR | YP_003232138.1 | type III secretion system protein | Virulence | LEE | Protein | 5e-20 | 41 |
| escR | AAC31528.1 | L0049 | Virulence | LEE | Protein | 4e-20 | 41 |
| escR | YP_003236103.1 | T3SS structure protein EscR | Virulence | LEE | Protein | 5e-20 | 41 |
| escR | ACU09473.1 | type III secretion system protein EscR | Virulence | LEE | Protein | 4e-20 | 41 |
| escR | NP_290283.1 | type III secretion system protein | Virulence | LEE | Protein | 5e-20 | 41 |
| escR | AAK26700.1 | EscR | Virulence | LEE | Protein | 4e-20 | 41 |
| escR | AAL57527.1 | EscR | Virulence | LEE | Protein | 4e-20 | 41 |
| ECs4583 | NP_312610.1 | type III secretion system protein | Virulence | LEE | Protein | 1e-19 | 41 |
| unnamed | AAL06354.1 | EscR | Virulence | LEE | Protein | 4e-21 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| swp_5086 | YP_002314288.1 | Flagellar transport protein FliP | VFG1259 | Protein | 4e-45 | 59 |
| swp_5086 | YP_002314288.1 | Flagellar transport protein FliP | VFG2016 | Protein | 5e-43 | 58 |
| swp_5086 | YP_002314288.1 | Flagellar transport protein FliP | VFG2338 | Protein | 2e-41 | 54 |
| swp_5086 | YP_002314288.1 | Flagellar transport protein FliP | VFG2494 | Protein | 4e-44 | 50 |
| swp_5086 | YP_002314288.1 | Flagellar transport protein FliP | VFG0044 | Protein | 1e-22 | 42 |
| swp_5086 | YP_002314288.1 | Flagellar transport protein FliP | VFG0394 | Protein | 1e-21 | 41 |
| swp_5086 | YP_002314288.1 | Flagellar transport protein FliP | VFG0827 | Protein | 2e-20 | 41 |
