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Name : swp_0491 (swp_0491) Accession : YP_002309909.1 Strain : Shewanella piezotolerans WP3 Genome accession: NC_011566 Putative virulence/resistance : Virulence Product : MSHA biogenesis protein MshE Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 511741 - 513459 bp Length : 1719 bp Strand : + Note : - DNA sequence : ATGCGGCTCGGTGATCTGCTCGTTCAAGAGCACATCATTACTGACGATCAGCTCAGTCAAGCGCTTAGTGAACAGCGAAA CTCGGGTAAGAAGCTTGGGCGTACGCTAATCGATCTCTCTTGCATCACTGAAGAGCAGTTGCTGAAGTTTTTGTCACAGC AACTTAATATCCCTTTCTTAGATATCAGCAAGCGCTCTATCTCTCCCGCTGTTGTTGGATTGTTGCCAGAGGTACAGGCA CGTCGATATCGTGCATTAGTGGTTGAAGATCAGGGTGAGTCAGCCCTAGTCGCTATGAGTGATCCAGCCGATCTACAAGC GATGGACACCTTAGAAGGTTTGTTAGCTCCGAAGCGAATTAACATTGCAGTTGTCACAGAAAATCAGTTGCTTGATGCTT TTGATAACCTCTATCGCCGTACTGAAGAGATTGCAGAAATAGCGGGTAAGTTAGAAGAGGAATATGCCGCTGATGAGCTA TTTGACCTTGCCAACCTAACTGATGCCGACAGTGATAACGAAACAACCGTAGTTAAGTTATTGCAGTCGATATTTGAAGA TGCCGTGCAGATGCGTGCCTCGGATATCCATATCGAACCTGGTGAAAACGCCTTAAGGATCCGCCAACGTATTGATGGGC AGTTGCACGAAAATGTATTGCCTGAGGTCAATATTGCTGCAGCATTAGTGCTACGTTTGAAACTGATGGCTGGGCTTGAT ATCTCTGAAAAACGTTTGCCGCAAGATGGTCGTTTTCATATGGAGATTAAAGGACATAAGATTGATGTGCGTATGTCTAC CATGCCAATTTATCATGGTGAGTCAGTCGTTATGCGTCTTTTGGATCAATCAGCAGGCTTATTAACGCTGAATGAGACTG GTATGCCACCCGAGATGTTGGCGCGGATCAGAAGGCAGATTAAGCGTCCTCATGGTATGTTGCTGGTTACAGGACCAACA GGTAGTGGTAAAACCACCACCTTGTATGGCGTATTAAGTGAGCTAAACACTGCTGACAGAAAAATTATCACCGTAGAAGA TCCAGTCGAGTATCAGCTACCGCGCATTAATCAGGTGCAAGTTAATCACAAAATAGGCCTAGATTTCTCTAACGTACTGA GAACTACCTTGCGTCAAGATCCCGATATTATCATGGTGGGTGAGATGCGAGATCAAGAGACTGTCGAGATTGGTCTGCGT GGTGCATTAACCGGTCACTTTGTACTGTCAACTCTGCATACCAATGATGCGGTAACCAGTGCATTAAGACTATTAGATAT GGGCGCTGCGGCTTATCTTGTCGCCAGTGCGCTTAGAGTGATTATCGCTCAGCGCTTGGTGCGTCGGGTATGTCAAAACT GTGCCAACCCCTACACACTTAGCGCACAAGACAAAGTCTGGTTGTCTACCGTTAGCAAGCTAGATTTCTCTAACGCGACC TTTAGGACTGGCTCAGGTTGTCAAAGCTGTAATGGCAGTGGTTACCGTGGTCGAATCGGGGTGTTTGAGATCTTAGAGCT CGACGAGCCGATGATTGAAGCGATGCGTTCAGGCAACCCGCAAGAGTTTACTAACGCCGCTTATAATAGCCCTAATTTTA CCCCGTTAGCAGACTCTGCCCTAGACTATCTTGCCCAAGGGATGACAACCATTGAAGAGGTTGCCAAGTTGGTTGAAGAT GTTAGTGATGACACGCTCGTGATAGGTGAGGGAGCATAA Protein sequence : MRLGDLLVQEHIITDDQLSQALSEQRNSGKKLGRTLIDLSCITEEQLLKFLSQQLNIPFLDISKRSISPAVVGLLPEVQA RRYRALVVEDQGESALVAMSDPADLQAMDTLEGLLAPKRINIAVVTENQLLDAFDNLYRRTEEIAEIAGKLEEEYAADEL FDLANLTDADSDNETTVVKLLQSIFEDAVQMRASDIHIEPGENALRIRQRIDGQLHENVLPEVNIAAALVLRLKLMAGLD ISEKRLPQDGRFHMEIKGHKIDVRMSTMPIYHGESVVMRLLDQSAGLLTLNETGMPPEMLARIRRQIKRPHGMLLVTGPT GSGKTTTLYGVLSELNTADRKIITVEDPVEYQLPRINQVQVNHKIGLDFSNVLRTTLRQDPDIIMVGEMRDQETVEIGLR GALTGHFVLSTLHTNDAVTSALRLLDMGAAAYLVASALRVIIAQRLVRRVCQNCANPYTLSAQDKVWLSTVSKLDFSNAT FRTGSGCQSCNGSGYRGRIGVFEILELDEPMIEAMRSGNPQEFTNAAYNSPNFTPLADSALDYLAQGMTTIEEVAKLVED VSDDTLVIGEGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-79 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-79 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| swp_0491 | YP_002309909.1 | MSHA biogenesis protein MshE | VFG2426 | Protein | 5e-69 | 41 |
| swp_0491 | YP_002309909.1 | MSHA biogenesis protein MshE | VFG1876 | Protein | 1e-84 | 41 |
