|
Name : swp_4557 (swp_4557) Accession : YP_002313786.1 Strain : Shewanella piezotolerans WP3 Genome accession: NC_011566 Putative virulence/resistance : Unknown Product : Cystathionine gamma-synthase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0626 EC number : 2.5.1.48 Position : 4779407 - 4780567 bp Length : 1161 bp Strand : - Note : - DNA sequence : ATGACCGAGCGTAAACTAGCCACCGCTGCTGTGCGCCAAGGCATTGAGTCCGATACCCAACATGGTGCAGTCGTGCCCCC CATTTATCTCTCTACAAACTATTCTTTTGACGGTCACAAAAATCCAAGAGATTTTGATTACAGCCGTTCAGGTAACCCAA CTCGCTCGATTCTCGGTGATGCAATTGCTGAACTAGAGAAAGGCTGTACTGGCGTTGTGACATGCACTGGAATGGCGGCA ATTACTCTAGCGACAAGTTTACTCGGTCCTGATGACTTATTAGTGGTGCCTCATGATTGTTATGGTGGCAGTTATCGCTT ATTTACTAATTTGGCTAAGAAAGGCCAGTTTAAGCTAGAAGTTGTCGATCAAACTGATGCCAGTGCATTAGCTGCTGCGA TTGCCAAACAACCTAAGATGGTTTGGCTAGAAACCCCTTCAAACCCATTACTTCGGGTCGTTGATATCGAAGCTATTAGC GCAGCTAGTCATGAAGTTGGTGCATTAGTTGTGGTTGATAACACTTTTCTATCGCCTATCTTGCAGCAACCTCTCTTACT TGGCGCTGATATTGTTATTCACTCGACCACTAAATACATCAATGGTCACAGCGATGTAGTTGGTGGAGCCGTGGTGGCTA AAGATGAAGAGTTGGGTGAATTGTTGCATTGGTGGTCGAATACGCTAGGGCTAACGGGTGGTGCATTTGATAGTTACCTT ACATTGCGCGGAATTCGAACACTTGCAGTGAGAATTCGTGAGCATCAGGCCAATGCCCAGCGAATTCTTGCTACTCTTAG CGCTCATAGTGCAGTGGAGAAAATCTATTATCCAGGTCTTGCTGATCATCCAGGTCATGAGATTGCCGCTAAACAGCAAA AGGGCTTTGGTGCCATGCTCAGCTTTGAGCTAAAGGGCGGCGAAGAGCAATTAGTCGCTTTCTTAAAAAATCTTAATTAT TTCTCTGTTGCAGAAAGCCTCGGAGGAGTAGAAAGTCTAGTGGCAGTGCCTGCAACCATGACGCATCGAGCGATGGAACC AGAAGCGCGTGCAGAGGCTGGGGTAAAAGACACCCTTATCCGTCTGTCTGTTGGTATTGAAGATGCTGACGATCTTGTCG CTGATATTGAAGCTGCGCTTAATGCAGCTGTAGCTTGTTAA Protein sequence : MTERKLATAAVRQGIESDTQHGAVVPPIYLSTNYSFDGHKNPRDFDYSRSGNPTRSILGDAIAELEKGCTGVVTCTGMAA ITLATSLLGPDDLLVVPHDCYGGSYRLFTNLAKKGQFKLEVVDQTDASALAAAIAKQPKMVWLETPSNPLLRVVDIEAIS AASHEVGALVVVDNTFLSPILQQPLLLGADIVIHSTTKYINGHSDVVGGAVVAKDEELGELLHWWSNTLGLTGGAFDSYL TLRGIRTLAVRIREHQANAQRILATLSAHSAVEKIYYPGLADHPGHEIAAKQQKGFGAMLSFELKGGEEQLVAFLKNLNY FSVAESLGGVESLVAVPATMTHRAMEPEARAEAGVKDTLIRLSVGIEDADDLVADIEAALNAAVAC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 5e-66 | 42 |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 2e-67 | 42 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 8e-55 | 42 |
