Gene Information

Name : swp_4400 (swp_4400)
Accession : YP_002313632.1
Strain : Shewanella piezotolerans WP3
Genome accession: NC_011566
Putative virulence/resistance : Resistance
Product : Sulfate transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0659
EC number : -
Position : 4609342 - 4610829 bp
Length : 1488 bp
Strand : +
Note : -

DNA sequence :
ATGTTTAAAAATTTCAAAATTGATTGGATATCTAATATTCGTGGCGACATGCTCGCGGGTATCGTTGTTGCCCTAGCGCT
AATTCCAGAAGCTATCGCCTTTTCGATTATTGCTGGTGTCGACCCTAAAGTAGGCCTTTATGCCTCATTCAGTATTTCGG
TCGTTATTGCCTTTACTGGAGCCCGTCCTGGGATGATTTCAGCGGCAACTGGTGCTATGGCACTGTTAATGGTTACGCTA
GTAAAAGAGCATGGGTTGCAATACTTACTTGCAGCAACGGTGTTAACAGGCCTGCTACAGATCCTTGCTGGTTATCTAAA
GCTTGGGGATCTAATGCGCTTTGTATCGCGCTCGGTGGTAACTGGATTTGTGAATGCCTTAGCAATACTCATTTTTATGG
CGCAACTTCCTGAACTCAGCAATGTTACCTGGCATGTATATGCAATGACATTAGCAGGGCTAGCGATTATCTACCTGTTT
CCCTATTTACCGATTATCGGTAAAGTGGTGCCCTCCCCTTTAGTCTGTATTGTAGGCTTAACAGCATTTACGATGATGTT
CGATGTTGATATACGCACAGTGGGCGATATGGGCGATCTACCCGATACTTTGCCGATATTCCTATGGCCTGATGTACCGT
TAAACCTCGATACCTTACTGATTGTATTACCTTACTCTTTGGGACTAGCTGTTGTCGGACTGTTAGAGTCAATGATGACT
GCAACCATTGTCGATGACCTTACCGATACCTGTAGTGATAAGAATCGTGAATGTAAGGGCCAAGGGTTGGCCAATATATC
AACAGGTTTACTGGGTGGTATGGCAGGTTGTGCCATGATTGGTCAGTCGATGATTAACATAAAATCTGGTGGCCGTGGAC
GTTTATCCAGTTTTTCGGCGGGAATTTTTCTGCTGATTATGGTGGTGTTTCTTGGCCCTTGGTTAAAACAGATCCCAATG
GCCGCCTTAGTAGCCATCATGATAATGGTGGCCATTGGTACCTTCTCTTGGCGTTCAATTATCGACATGAAGAAGCATCC
ACTGTCGACCAACATTGTCATGCTGTCGACGGTAGTCGTGGTGGTGGCAACCCATAACCTCGCCATAGGAGTACTTGTAG
GTGTGTTACTGGCATCGCTATTTTTCGCCAACAAGATCAGCCGCATGATGGTGATAAAGAGAAACAACGCTAAAAATGAC
AGCTGTGAGTATCGTGTTATCGGACAAGTGTTTTTTGCATCCGCGGATAAATTTATTGATTCGTTTGATTTTAAGCAAGT
TTTAGAATCGGTCACCATTGATCTGTCTGCGACTCATTTCTGGGATGTCACTGCGGTATCAGCATTAGATAAAGTAGTGA
TTAAGTTTCGCCGTGAAGGGACGCAAGTAAACCTCATTGGCATGAATCAAGCGACCCGCACCATTGTCGATAAGTTTGGT
GTACATGACAAACCCGAAGAAGTTGAAAGACTATTGGCTGGACATTAA

Protein sequence :
MFKNFKIDWISNIRGDMLAGIVVALALIPEAIAFSIIAGVDPKVGLYASFSISVVIAFTGARPGMISAATGAMALLMVTL
VKEHGLQYLLAATVLTGLLQILAGYLKLGDLMRFVSRSVVTGFVNALAILIFMAQLPELSNVTWHVYAMTLAGLAIIYLF
PYLPIIGKVVPSPLVCIVGLTAFTMMFDVDIRTVGDMGDLPDTLPIFLWPDVPLNLDTLLIVLPYSLGLAVVGLLESMMT
ATIVDDLTDTCSDKNRECKGQGLANISTGLLGGMAGCAMIGQSMINIKSGGRGRLSSFSAGIFLLIMVVFLGPWLKQIPM
AALVAIMIMVAIGTFSWRSIIDMKKHPLSTNIVMLSTVVVVVATHNLAIGVLVGVLLASLFFANKISRMMVIKRNNAKND
SCEYRVIGQVFFASADKFIDSFDFKQVLESVTIDLSATHFWDVTAVSALDKVVIKFRREGTQVNLIGMNQATRTIVDKFG
VHDKPEEVERLLAGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ABTW07_3869 YP_005797117.1 sulfate permease Not tested AbaR4e Protein 2e-167 78
sup AFV47978.1 sulphate premease Sup Not tested delta-AbaR25 Protein 1e-169 77
ABZJ_00258 YP_005524214.1 sul1delta fusion protein Not tested AbaR22 Protein 2e-169 77
ABTW07_3910 YP_005797158.1 sul1delta fusion protein Not tested AbaR4e Protein 2e-169 77
sup AEQ20903.1 sulphate permease Not tested Tn6166 Protein 2e-169 77
ABK1_0240 YP_005512812.1 Sul1delta fusion protein Not tested AbaR4d Protein 2e-169 77
sup AEZ06030.1 sulphate permease Not tested Tn6167 Protein 2e-169 77
BJAB07104_00259 YP_008207724.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 2e-169 77
BJAB07104_00275 YP_008207740.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 2e-169 77
BJAB0868_00263 YP_008211589.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 2e-169 77
sup AFH57200.1 sulfate permease Not tested AbaR4a Protein 1e-169 77
BJAB0868_00279 YP_008211605.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 2e-169 77
sup AFV47947.1 sulphate premease Sup Not tested AbaR25 Protein 1e-169 77
ABZJ_00239 YP_005524195.1 sul1delta fusion protein Not tested AbaR22 Protein 2e-169 77
unnamed AEO37462.1 Sup* Not tested AbaR4 Protein 1e-167 77
sulI CAJ77098.1 sulfate permease Not tested AbaR1 Protein 1e-156 73
sup AGK36657.1 sulphate permease Not tested AbaR26 Protein 1e-156 73
ACICU_00239 YP_001844898.1 MFS superfamily sulfate permease Not tested AbaR20 Protein 2e-156 73
sup ACN81033.1 sulphate permease Not tested AbaR5 Protein 2e-156 73