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Name : swp_4303 (swp_4303) Accession : YP_002313541.1 Strain : Shewanella piezotolerans WP3 Genome accession: NC_011566 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase, class-2 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 4505614 - 4507116 bp Length : 1503 bp Strand : - Note : - DNA sequence : ATGACTGAACAAACACAAGATGAGAACAAGTTAATTGCAGAACGCCGTGCCAAGTTAGAGCACATCCGCGCGAACTGCCC AGCAAACGGTCACCCGAACAACTTCGATCGAAAACACAAAGCGGCAGATATCCAAGCTGAGTATGGTCACCATACTAAAG AAGAGCTTGAAGGCATGGACGTTCAACGTTCAATCGCTGGTCGTGTTATGGCTAAGCGTGGCCCATTTTTGGTTATCCAA GATGTGAGCGGACGTATCCAAGCTTATGCGGGTAAGGATGTTCAAAAAGATCTTAAAGCCACTTTCCAAGGTCTAGATAT CGGTGACATCATAGGTGTGACAGGCAAGCTGCACCTTTCTGGTAAAGGTGACCTTTACGTGAACATGGAACAGTACCAGT TGCTAACTAAAGCACTGCGTCCACTGCCTGAAAAATTCCACGGCTTGTCAGATCAAGAAACTCGTTACCGTCAGCGTTAC GTTGACTTGATTGTTAATGAAGAGTCTCGTGAAGCCTTTATCATGCGTTCAAAGGTTGTTTCAGCAATCCGTAACTTCAT GATCAAAAAAGAGTTCATGGAAGTTGAAACCCCAATGATGCACAGCATCCCAGGTGGCGCTTCAGCTCGTCCATTTGAAA CGCATCATAATGCCTTAGATATGGCTATGTATCTGCGTATCGCACCAGAGCTGTACCTTAAGCGTTTGGTTGTTGGTGGC TTTGAGCGTGTATTTGAAGTTAACCGTAACTTCCGTAACGAAGGCTTGTCTCCTCGTCATAACCCAGAATTCACTATGAT GGAATTCTACATGGCGTACGCTGACTATAAAGATCTGATGGATCTTACCGAAGAGATGCTAAGTTCTATCGCCACTGATC TTTGTGGTTCAACTCAGCTGCCATACGGTGAGCATACGGTTGATTTTGGTGGCCCTTACGCGCGTTTAAGCATGTTGGAT GCGATCAAGAAGTACAACCCAGAAAACGCAACGATTCAGTCAATGACTTATGAAGAAGTTAAAGACGTTGAGTTTATGCG TAACCTGGCGAAAAGCATCGGCATGACAATCGAGAAGTTCTGGACTTGTGGTCAACTGCTTGAAGAGATCTTCGGTGAAA CAGCTGAGCCTCAGCTAATGCAACCTACTTTCATTACTGGCTACCCTGCAGACATCTCTCCGCTGGCACGTCGTAATGAT GAAAACCATTTTATCACTGACCGTTTCGAGTTCTTTATCGGTGGCCGTGAAGTGGCTAACGGTTTCTCTGAGCTTAACGA TGCAGAAGATCAAGACAACCGTTTTAAAGCTCAGGTTGACGCGAAAGATGCTGGTGATGACGAAGCAATGTTCTATGACG CAGATTATATCCGCGCACTAGAGCACGGCCTACCGCCAACAGCGGGTCAAGGTATTGGTATCGACCGTTTGGTGATGCTA TTTACCAACACGCACACTATTCGTGACGTGATTCTGTTCCCAGCGATGCGCCCACAAGGGTGA Protein sequence : MTEQTQDENKLIAERRAKLEHIRANCPANGHPNNFDRKHKAADIQAEYGHHTKEELEGMDVQRSIAGRVMAKRGPFLVIQ DVSGRIQAYAGKDVQKDLKATFQGLDIGDIIGVTGKLHLSGKGDLYVNMEQYQLLTKALRPLPEKFHGLSDQETRYRQRY VDLIVNEESREAFIMRSKVVSAIRNFMIKKEFMEVETPMMHSIPGGASARPFETHHNALDMAMYLRIAPELYLKRLVVGG FERVFEVNRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIATDLCGSTQLPYGEHTVDFGGPYARLSMLD AIKKYNPENATIQSMTYEEVKDVEFMRNLAKSIGMTIEKFWTCGQLLEEIFGETAEPQLMQPTFITGYPADISPLARRND ENHFITDRFEFFIGGREVANGFSELNDAEDQDNRFKAQVDAKDAGDDEAMFYDADYIRALEHGLPPTAGQGIGIDRLVML FTNTHTIRDVILFPAMRPQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-137 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| swp_4303 | YP_002313541.1 | Lysyl-tRNA synthetase, class-2 | VFG1668 | Protein | 1e-137 | 56 |
