Gene Information

Name : swp_4223 (swp_4223)
Accession : YP_002313465.1
Strain : Shewanella piezotolerans WP3
Genome accession: NC_011566
Putative virulence/resistance : Unknown
Product : ISSwp3, transposase OrfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3547
EC number : -
Position : 4423741 - 4424559 bp
Length : 819 bp
Strand : +
Note : -

DNA sequence :
TTGCTTACCAGCCTAGGTCACTGTTGCTATGTTATAGCCCCTTCACTTATTCCCAAAAAACCTGGTGAGAAAATTAAAAC
CGATAAACGTGATGCGCTTAAATTAGCAAAGCTGCTTAAGTCGGAAGATCTTAGCGCGATTTATGTTCCAGAGCCTGAAG
ATGAAGCTATCCGCGATTTATCTCGTGCTCGTGAGACCGCGATGAAAGATTTAAAAGATGCCAAATACCAGCTTAAAGCG
CTTCAGCTAAGAAACAATATTAACTACAGAGGCACTGCTAACTGGTCGCTAAAGCACTTACGCTGGCTGACTGAACTGAT
ATTGCCGCACCCGAGTCAACAGATTGTCTTGCAAGAATACTTACAAACCATTTCAGAGCGGATCGCGAGGCTAAAACGGC
TAGACAATGAACTTGAGCATCACGTTAAAAAGTGGCGTTACTATCCGGTCATCAAAGCCATACAAGCATTACGTGGAGTG
AGGTTACTGGTTGCTGCAGGTGTCATTGCTGAGTTGGGAGACTTAACTCGCTTTGATCATCCCCGAAAACTAATGAGTTA
TGTAGGCCTAGTTCCATCGGAACACTCAAGTGGTGGAAAGCGGCATTTGGGTGCGATAACGAAATGCGGCAATGGTCGAG
CAAGACGGCTATTAGTCGAAGGGGCTCACTCCTATCGCTACCCCGCTAAGATCTCAAGCGAGATGCAAATAAGACAAGAA
GGTTTACCGAAAGAAATCATTGATATTGCATGGCAAGCGCAGCTTAGGCTTTGTCGTCGATACCAAAACTCATGTACAAA
GGTAAACATAACAACGTAG

Protein sequence :
MLTSLGHCCYVIAPSLIPKKPGEKIKTDKRDALKLAKLLKSEDLSAIYVPEPEDEAIRDLSRARETAMKDLKDAKYQLKA
LQLRNNINYRGTANWSLKHLRWLTELILPHPSQQIVLQEYLQTISERIARLKRLDNELEHHVKKWRYYPVIKAIQALRGV
RLLVAAGVIAELGDLTRFDHPRKLMSYVGLVPSEHSSGGKRHLGAITKCGNGRARRLLVEGAHSYRYPAKISSEMQIRQE
GLPKEIIDIAWQAQLRLCRRYQNSCTKVNITT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECUMN_3362 YP_002414036.1 transposase, IS110 family Not tested Not named Protein 1e-38 42
unnamed AAL67336.1 putative transposase Not tested PAI II CFT073 Protein 1e-33 41