Gene Information

Name : swp_0402 (swp_0402)
Accession : YP_002309821.1
Strain : Shewanella piezotolerans WP3
Genome accession: NC_011566
Putative virulence/resistance : Unknown
Product : Porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 419600 - 420484 bp
Length : 885 bp
Strand : -
Note : -

DNA sequence :
ATGTGGCAAGCTGAATTTGTGAAAGCTGAACTGGAAAAAATCCATGAAGGCCTCACCGTTGAATTGCTGCCGATGAGCAC
TAAAGGTGACATCATCTTAGACACACCGCTTGCTAAAGTTGGTGGTAAAGGCTTATTCGTAAAAGAACTCGAAGTTGCCA
TGTTAGAAGACAGAGCTGATATCGCCGTTCATTCAATGAAAGACGTACCAGTTGATTTCCCTGAAGGCCTAGGTCTTGAA
GTTATTTGTGAACGTGAAGATCCACGTGATGCATTTGTGTCAAACAACTTCTCTAGCATCAATGAACTACCGCAAGGCGC
AGTGGTTGGAACTTCAAGCTTACGTCGTCAATGCCAGATCAGAGCGGCTCGTCCAGATCTTCAAATCAAAGATCTTCGCG
GTAATGTAGGTACTCGTTTAGCTAAACTTGATGCAGGTAACTATGATGCCATCATTCTTGCAGCAGCAGGTCTGAAGCGC
TTAAAGCTTGAAGAGAGAATTACCAGTTTCATATCAGCAGAAGACTCACTGCCAGCAAACGGCCAAGGTGCTGTAGGCAT
TGAATGTCGTACTGATGATGCTCGTGTAAAAGCACTTCTTGCACCATTGGAGCATTTAGAAACACGTCAACGCGTGATCG
CTGAACGTGCAATGAACACCCGTCTAGAGGGTGGATGTCAGGTGCCTATCGGCGCTTATGCTGAAATCGACGGCGATACG
TTAAGCCTGCGCGGTTTAGTGGGTAATCCAGATGGAAGCCAAGTCATTGAAGCCGCAACCTCTGGCAATAAGAACGATGC
AGAGCAACTTGGTGTAGCACTTGCTGAAGAGCTGCTTTCAAAAGGCGCAAAGACTATTCTTGATGCAGTGTATGCAAAAG
CATAA

Protein sequence :
MWQAEFVKAELEKIHEGLTVELLPMSTKGDIILDTPLAKVGGKGLFVKELEVAMLEDRADIAVHSMKDVPVDFPEGLGLE
VICEREDPRDAFVSNNFSSINELPQGAVVGTSSLRRQCQIRAARPDLQIKDLRGNVGTRLAKLDAGNYDAIILAAAGLKR
LKLEERITSFISAEDSLPANGQGAVGIECRTDDARVKALLAPLEHLETRQRVIAERAMNTRLEGGCQVPIGAYAEIDGDT
LSLRGLVGNPDGSQVIEAATSGNKNDAEQLGVALAEELLSKGAKTILDAVYAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 6e-79 62
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 6e-79 62