Gene Information

Name : swp_3307 (swp_3307)
Accession : YP_002312596.1
Strain : Shewanella piezotolerans WP3
Genome accession: NC_011566
Putative virulence/resistance : Resistance
Product : Transferase hexapeptide repeat protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 3488360 - 3489001 bp
Length : 642 bp
Strand : -
Note : -

DNA sequence : 
ATGTTTGGGCCAAATCCCGATGATAAATCGCCGATGAAAGGCTTCCCGCAAGTGGGATATTTAAAAAACTATATTAAGGG
CGACAACATCATAGTAGGAGATTATACCTATTATGACGATCCCGATGGCCCTGAGAATTTTGAGAATAACGTGCTTTATC
ATTTCCCATTTATTGGTGACAAACTGATTATTGGCAAATTTTGCGCTATTGCTAAAGACGTCAAGTTCATTATGAATGGC
GCCAACCATAAAGTGTCTGGTTTTTCGACCTATCCGTTTCAGATCTTCTCTAATGGCTGGGAAAAGGTGATGCCTAAAGA
GGGGGATTTACCTTTTAAAGGTGATACACAAATTGGCCATGATGTGTGGATTGGTTATGACGCGACGATTATGCCTGGGG
TCACGGTTGGCCATGGTGCTATTATCGCCAGTAAATCGGTGGTAACTAAAGATGTACCTGCGTATGGCGTTGTCGGCGGT
AACCCCGCTGAACTTATTAAACTCAGGTTTGAGCAACATATTGTTGAGCAACTTGTCGATATTGCTTGGTGGGATTGGAC
TGCTGAGAAAATTACCATCAACTTAGAGGCCATAGTTGACGCTGATATTACTGCGTTACAACAAGCAAAAATAACCAACT
GA

Protein sequence : 
MFGPNPDDKSPMKGFPQVGYLKNYIKGDNIIVGDYTYYDDPDGPENFENNVLYHFPFIGDKLIIGKFCAIAKDVKFIMNG
ANHKVSGFSTYPFQIFSNGWEKVMPKEGDLPFKGDTQIGHDVWIGYDATIMPGVTVGHGAIIASKSVVTKDVPAYGVVGG
NPAELIKLRFEQHIVEQLVDIAWWDWTAEKITINLEAIVDADITALQQAKITN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 5e-27 42
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 5e-27 42
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 5e-26 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
swp_3307 YP_002312596.1 Transferase hexapeptide repeat protein AM180355.1.gene2499. Protein 2e-37 50
swp_3307 YP_002312596.1 Transferase hexapeptide repeat protein AY740681.1.gene5.p01 Protein 2e-27 42
swp_3307 YP_002312596.1 Transferase hexapeptide repeat protein AF322577.2.gene4.p01 Protein 2e-27 42
swp_3307 YP_002312596.1 Transferase hexapeptide repeat protein AY123251.gene2.p01 Protein 2e-26 42
swp_3307 YP_002312596.1 Transferase hexapeptide repeat protein CP001581.1.gene990.p Protein 9e-26 41