Gene Information

Name : swp_3243 (swp_3243)
Accession : YP_002312535.1
Strain : Shewanella piezotolerans WP3
Genome accession: NC_011566
Putative virulence/resistance : Resistance
Product : Methionine gamma-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 4.4.1.11
Position : 3400255 - 3401433 bp
Length : 1179 bp
Strand : -
Note : -

DNA sequence : 
ATGCAAGAGAAATGGCAGCAAGCAACACAGGTTATTCATGCCGGACATATACCTAATGAACACGGTGCGCTGGTAACACC
TTTATGCCAAAGCGCAACGTTTGTATTTGATAATGCAGAGCAAGGCGGTGCTAGATTTGCTGGAGAGGAACCTGGCTTTA
TTTATACTCGCTTAGGTAATCCGACGACTGCTGAGCTTGAACGCAAAATCGCAGCGCTTGAGGGGAGTGATTGTGCGGCG
GCTACCGCATCCGGGATGGCTGCAGTGTCGGCTGCATTACTCGCAAATTTACAAAATGGCGATCACCTGATTGCATCAAA
TGCAGTCTATGGTTGTACATTTGCGTTGATGAACTCTCAACTTGCCAAGTTTGGCATCGAGGTGAGTTTGGTTGATTTTA
GTCGTCTCGATGAGATAGAAGCGGCGATTAAACCCAATACTAAAGTTCTTTTCTGTGAAACTCCGGTTAACCCCCACCTT
AAAGTATTCGATCTTGATGCCATTGCCCGTATTGCAAAAGCATATAAGTTGGTTAGCGTGGTTGACAACACTTTTATGAC
TCCGTTACTGCAACAACCGATAAAACACGGTATTGATATTGTGATTCATAGTGCAACTAAGTACCTCAACGGGCATGGCG
ATGTGATTGCGGGAGTGGTGTGTTCAAGCCGAGAACAGATGGACGTGATTAAGTATGAGGTGCTAAAAGATATTGGCGGG
GTAATCTCTCCCCATGATGCTTGGCTTATCCTGCGTGGCCTTAAAACCCTCGATGTAAGGCTACAACGTCATTGTGATAG
TGCTGAGCGTGTTGCTGAATTCTTGGAGGGGCATAGTAAAGTTTCTAAGGTTTACTACCCTGGGCTAAAAACTCACTGTG
GGAACGGGCTCGTTGGCCATCAAATGAAGCGAGCTGGAGGCGTAATTGCCTTTGAATTGGAAGCGGATCTGCAAGCTTCT
ATTAAGTTTATAAACCAGTTAGAGCTGTTTTCCATTGCCGTGAGCCTAGGAGATGCTGAGTCATTGATCCAGCATCCTGC
GTCGATGACGCACTCACCTTATAGCCCAGAAGAGCGAGAAAAAGCTGGAATAACGGACAATCTGTTACGGATTTCAATCG
GATTGGAAGCCGTCGAAGATATTATTTTCGCGCTCGATAAAGGATTAGCTGCATTATAA

Protein sequence : 
MQEKWQQATQVIHAGHIPNEHGALVTPLCQSATFVFDNAEQGGARFAGEEPGFIYTRLGNPTTAELERKIAALEGSDCAA
ATASGMAAVSAALLANLQNGDHLIASNAVYGCTFALMNSQLAKFGIEVSLVDFSRLDEIEAAIKPNTKVLFCETPVNPHL
KVFDLDAIARIAKAYKLVSVVDNTFMTPLLQQPIKHGIDIVIHSATKYLNGHGDVIAGVVCSSREQMDVIKYEVLKDIGG
VISPHDAWLILRGLKTLDVRLQRHCDSAERVAEFLEGHSKVSKVYYPGLKTHCGNGLVGHQMKRAGGVIAFELEADLQAS
IKFINQLELFSIAVSLGDAESLIQHPASMTHSPYSPEEREKAGITDNLLRISIGLEAVEDIIFALDKGLAAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-59 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
swp_3243 YP_002312535.1 Methionine gamma-lyase BAC0207 Protein 9e-81 48