Gene Information

Name : swp_3118 (swp_3118)
Accession : YP_002312417.1
Strain : Shewanella piezotolerans WP3
Genome accession: NC_011566
Putative virulence/resistance : Unknown
Product : Aspartate beta-D-semialdehyde dehydrogenese
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0136
EC number : 1.2.1.11
Position : 3268626 - 3269642 bp
Length : 1017 bp
Strand : -
Note : -

DNA sequence :
ATGTCGCAGGAATATAATGTTGTCGTATTAGGTGCATCGGGCGCAGTGGGTCAAACAATGATTGAGATCCTCGAAGAGCG
CAATTTTCCGATTGCAAATTTGTACCCTTTAGCCAGCAGTCGTAGCGCCGGTAATACGGTAAGCTTCCATGGTAAACAGG
TCGAGATTTTAGACGTAGATACCTTTGACTGGTCACAAGCTCAAATTGGTTTCTTTTCTGCAGGTGGGGATGTTTCTGAA
AAGTGGGCGCCTATTGCCGCCGAACAAGGTTGTGTTGTTATCGATAACACCTCGCACTTCAGATATGACATCGATGTGCC
ATTAGTGGTTCCTGAAGTTAACCCTGAAGCTATTGCAGATTTTAGAAATCGCAATATTATTGCTAACCCTAACTGCTCAA
CGATCCAAATGCTGGTAGCGTTGAAGCCCATCCATGATGCTTACGGGATCTCGCGTATTAACGTTGCGACATACCAGTCG
GTATCTGGATCTGGTAAACAGTCAGTTGAAGAGTTAGCCACACAGTGCTCTAAGTTGCTTCAAGGTTTACCCGTTGAGCC
AAAAACTTACTCAAAGCAAATTGCGTTTAACGTGTTACCGCAAATTGATAAGTTTATGGACAATGGCTACACCAAAGAAG
AGATGAAAATGGTGTGGGAAACACAGAAAATTTTCGGTGATGAAAATATTGTTGTGAACCCTACCGCTGTGCGTGTACCT
GTGTTTTACGGTCATTCAGAAGCGATTCACCTTGAAACCTTGCAACCTGTCGACGCTGAAGATGTTAAAGCAGTGTTGCG
TGGGGCACCTGGTGTTGAACTGTTTGAGTCAGATGAAGAGTATCCGACGGCAGTTGATGACGGCGCTGGAACAGATCCCG
TTTATGTTGGTCGCGTTAGAAAAGATATTTCTCATGACAATGGCATAAACCTTTGGGTCGTCTCTGATAATATCCGTAAA
GGTGCTGCATTAAATAGCGTACAGATAGCTGAAGTGTTAATCCGAGATTATTACTAA

Protein sequence :
MSQEYNVVVLGASGAVGQTMIEILEERNFPIANLYPLASSRSAGNTVSFHGKQVEILDVDTFDWSQAQIGFFSAGGDVSE
KWAPIAAEQGCVVIDNTSHFRYDIDVPLVVPEVNPEAIADFRNRNIIANPNCSTIQMLVALKPIHDAYGISRINVATYQS
VSGSGKQSVEELATQCSKLLQGLPVEPKTYSKQIAFNVLPQIDKFMDNGYTKEEMKMVWETQKIFGDENIVVNPTAVRVP
VFYGHSEAIHLETLQPVDAEDVKAVLRGAPGVELFESDEEYPTAVDDGAGTDPVYVGRVRKDISHDNGINLWVVSDNIRK
GAALNSVQIAEVLIRDYY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDB402_0195 YP_005126708.1 aspartate-semialdehyde dehydrogenase Not tested Not named Protein 2e-47 41