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Name : swp_3111 (swp_3111) Accession : YP_002312410.1 Strain : Shewanella piezotolerans WP3 Genome accession: NC_011566 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 3258012 - 3259997 bp Length : 1986 bp Strand : - Note : - DNA sequence : ATGATCTTATATATTGCCGAGAAACCCAGTTTAGGTAGAGCCATTGCCGACGTATTGCCTAAACCACTAAAAAAGGGTGA AGGGTTTATACGCGCAGCTAATGGCGATTGTGTTTCTTGGTGCGTTGGGCATCTGTTGGAGCAAGCTGAGCCCGATGCAT ACTCGCCTGAGTATAAATCGTGGAAATTTGAACATCTGCCAATCGTGCCTGATGTGTGGAAGATGAAGCCAAAATATAAG ATGCGTGGCCAGATCTCGGTGCTTAGAGGGTTAGTTAAAGAAGCGACACAATTGGTTAACGCGGGCGATCCCGATAGAGA GGGGCAGCTGCTAGTCGATGAGATCATTGCTCACCTAGGGGTTAAAGGTAATAAATTAACACAAGCTAAAAGACTGCTGA TAAGTGATTTAAACCCGCAAGCAGTAAAGCGCGCCTTGGGGCAGTTACGGCTTAATCGTGAGTTTATTCCGCTATCAACT TCTGCATTAGCACGCTCACGCGCTGACTGGCTTTATGGCATGAATATGACGCGTGCTTATACTATTCAAGGCCGCAAAGT CGGTTATCAAGGTGTCCTTTCCGTTGGTCGAGTTCAAACTCCTATATTGGGTTTAGTGGTGCGCCGAGACGAAGAGATTG CTCATTTTGTCTCTAAGCCATTTTTCGAGGTCATTGCCCATTTAACTGCAGAGCCGCAGCAAACATTTACTGCTAAATGG CAACCTAGTGAGGCTTGCCAGCCCTATATGGATGAAGACGGGCGGGTATTGTCTAAAGGGCTGGCGCAAAATGTAGTCGG CCGTATTACAGGTCAGCCAGCAACAGTTGAAAAAGTGAATGCGCAAGACAAGAAACAAAATGCACCATTACCCTACAATT TATCAAGCTTGCAAATTGATGCCGCTAAACGCTTTGGCATGAGTGCAAAAACAGTATTAGATACTTGTCAGTCTTTATAT GAGCGACACAAGCTAATCACTTACCCACGTTCAGATAGCCGTTATTTACCACAAGAGCAACATGGCATGGCGCCGAGTGT GATCAACACTGTTAATAAAGGCGCTCCCGAACTAACACAAGGCATTGACGCACCCAACGCCAAGCTTAAATCAAAAGCCT GGAATGATAAAAAAGTCGATGCTCACCATGCGATTATCCCAACGGAAAAAGTGGCTAACTTAAGCAGTTTGAGCCCAGCA GAGAAGCAAGTTTATCTGCTGGTGGCTCGGCAATATCTGATGCAGTTTTATAGTGCTTACCAATACAAAGAAACGCAGGT TGAAATCATTATTGCTGGCGGCTTATTTAAAACCAAAGCCAAACAGGAAATAGCTAAAGGTTGGAAGCTGCTGCTAAAAC AGAGTAAAGCGAGCACCAGTTCAGACTCTAACGGGCAAGATGAGGATGAGTTAGCGACAATTCCGCCTTTAACTATAGGG CAAAAGCTCTTTTGTGATCGCGGCCAGCTGTTAGAGAAGCAAACTCAGCCGCCAAAGCATTTTACTGACGCGACGCTTTT AAGCGCAATGACAGGCATTAGCCGTTTTGTTACTGATGTTGAGATCCGAAAAATACTTAAAGATACCGACGGTCTGGGCA CTGAAGCAACCCGTGCAGGCATAATTGAATTATTGTTTAAACGCAGCTTTCTAGTCAGGCAGGGCAAAACAATTGTTGCC ACTGATGTAGGCAAGGGATTGATTAACAGCTTACCCCTTAGCGCCACAACCCCTGATATGACCGCACTTTGGGAAAACAA CTTGGATTCAATGAGCCGAAAAGAAACTCAATATCAAGCCTTTATGCAGCCACTGATCAGCAAACTTGATGAACTCATCA CTCAAGCAGGCTCAGTGCTACCTACCGCATTGCAAGGGGTGAAAAGCCCGACACCGTTTAAGAAAAAAAGCTATGCACGT AAAGGCGGAAAAGGTCAGTCAACGACTAAGAAAAATGTCGGAAAACCCCGCATGGCTAAAAGTTAG Protein sequence : MILYIAEKPSLGRAIADVLPKPLKKGEGFIRAANGDCVSWCVGHLLEQAEPDAYSPEYKSWKFEHLPIVPDVWKMKPKYK MRGQISVLRGLVKEATQLVNAGDPDREGQLLVDEIIAHLGVKGNKLTQAKRLLISDLNPQAVKRALGQLRLNREFIPLST SALARSRADWLYGMNMTRAYTIQGRKVGYQGVLSVGRVQTPILGLVVRRDEEIAHFVSKPFFEVIAHLTAEPQQTFTAKW QPSEACQPYMDEDGRVLSKGLAQNVVGRITGQPATVEKVNAQDKKQNAPLPYNLSSLQIDAAKRFGMSAKTVLDTCQSLY ERHKLITYPRSDSRYLPQEQHGMAPSVINTVNKGAPELTQGIDAPNAKLKSKAWNDKKVDAHHAIIPTEKVANLSSLSPA EKQVYLLVARQYLMQFYSAYQYKETQVEIIIAGGLFKTKAKQEIAKGWKLLLKQSKASTSSDSNGQDEDELATIPPLTIG QKLFCDRGQLLEKQTQPPKHFTDATLLSAMTGISRFVTDVEIRKILKDTDGLGTEATRAGIIELLFKRSFLVRQGKTIVA TDVGKGLINSLPLSATTPDMTALWENNLDSMSRKETQYQAFMQPLISKLDELITQAGSVLPTALQGVKSPTPFKKKSYAR KGGKGQSTTKKNVGKPRMAKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-112 | 41 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 1e-112 | 41 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-112 | 41 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 9e-105 | 41 |
