Gene Information

Name : swp_3057 (swp_3057)
Accession : YP_002312361.1
Strain : Shewanella piezotolerans WP3
Genome accession: NC_011566
Putative virulence/resistance : Resistance
Product : Sulfate transporter/antisigma-factor antagonist STAS:Sulphate transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0659
EC number : -
Position : 3208525 - 3209961 bp
Length : 1437 bp
Strand : +
Note : -

DNA sequence :
ATGGTTGGCTTATATGCCGCCTTTATCATGGGATTAATTACCGCACTCATTGGTGGTCGCCCAGGCATGATTTCAGGTGC
TACTGGCGCGATGGCAGTGGTGATGGTCGCCCTAGTTGCTGAACATGGCGTACAGTATCTTTTTGCTGCTGTCGTGCTAG
CAGGTCTTATACAAGTCTCGGCTGGTGTACTAAAGCTCGGTAAATTTATCCGAATAGTGCCCTACCCGGTAATGATAGGC
TTTGTAAACGGTTTAGCTATTGTCATCTTCTTAGCACAGCTAGGACAGTTCCAAACTCCTGACGCAAACGGTGTAATGAG
CTGGCTACCACAGGATCAGTTATTACTGATGTTAGGGCTTGTTGCGCTGACGATGGCGATTATTCAGTTCTTACCAAAAC
TGACCACGACAATACCGTCATCTTTAGCGGCTATTTTAACGGTAACCTTATTAGTCACATTCTTGAATCTTGATACGCGT
ACCGTATTAGATTTCTTGAAATCAATGAGTGGTGATGAGCACGCAACCATTGCTGGTAGCTTACCAACATTCTCTATTCC
AGCGGTAGAATTTAGCCTGGCAACACTTTACATCATCTTGCCTTACTCACTAATCCTTGCTGCTGTTGGTCTTATTGAGT
CACTACTAACGCTAACTGTTATTGATGAGATGACAGGTACTCGTGGCCGAGGTAATAAAGAGTGTATTGGTCAAGGCGTC
GGTAACATCACGAGCGGCTTCTTTGGCGCTATGGGTGGTTGTGCGATGATTGGTCAGTCAATGATTAACATTAATTCTGG
CGGACGTGGCCGTTTATCAGGAATAACCGCTGCAGTGGCACTGCTTGCGTTTATTTTGTTTGGTTCATCACTGATTGAAA
TGATCCCACTCGCGGCACTTGTCGGCGTAATGTTTATGGTGGTTTTAGGTACGTTTGAATGGGCTAGCTTTAAGGTTATG
CGCAAAGTACCTAAGCACGATGCTTTTGTGATTATCCTAGTGACAATCGTAACTGTATTTACCGATCTCGCGTTCGCCGT
ATTTGTTGGTGTCATCGTATCGGCACTTGTGTTCGCATGGGAACATGCAAAACATATCAATGTAGAGATCAGTGAAGACA
AGAATGGCTGGAAAGTATATAAACTTAATGGCCCACTATTCTTTGGTTCAGTCGCTGAGTTTTTAGAGCTGTTTCACGCC
AAGACAGATCCTGAAGATGTGATTGTTGATTTCCAAAACTCACGTGTATGTGACCACTCAGCACTTGATGCTATTGATAC
CCTTGCAGAGCGTTATGTAAGCGCGGGTAAAAAACTGCACCTGCGTCACCTAAGTAACGACTGTAAAGAGTTGTTGCATA
AAGCAGGTGATTTAGTTGAAGTTAACTTAATCGAAGATCCACATTACAAAGTAGCGGACGATAAGCTCGATTCGTAA

Protein sequence :
MVGLYAAFIMGLITALIGGRPGMISGATGAMAVVMVALVAEHGVQYLFAAVVLAGLIQVSAGVLKLGKFIRIVPYPVMIG
FVNGLAIVIFLAQLGQFQTPDANGVMSWLPQDQLLLMLGLVALTMAIIQFLPKLTTTIPSSLAAILTVTLLVTFLNLDTR
TVLDFLKSMSGDEHATIAGSLPTFSIPAVEFSLATLYIILPYSLILAAVGLIESLLTLTVIDEMTGTRGRGNKECIGQGV
GNITSGFFGAMGGCAMIGQSMININSGGRGRLSGITAAVALLAFILFGSSLIEMIPLAALVGVMFMVVLGTFEWASFKVM
RKVPKHDAFVIILVTIVTVFTDLAFAVFVGVIVSALVFAWEHAKHINVEISEDKNGWKVYKLNGPLFFGSVAEFLELFHA
KTDPEDVIVDFQNSRVCDHSALDAIDTLAERYVSAGKKLHLRHLSNDCKELLHKAGDLVEVNLIEDPHYKVADDKLDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ABTW07_3869 YP_005797117.1 sulfate permease Not tested AbaR4e Protein 2e-66 42
unnamed AEO37462.1 Sup* Not tested AbaR4 Protein 2e-66 42
sup AFH57200.1 sulfate permease Not tested AbaR4a Protein 2e-66 42
ABZJ_00258 YP_005524214.1 sul1delta fusion protein Not tested AbaR22 Protein 3e-66 42
sup AFV47947.1 sulphate premease Sup Not tested AbaR25 Protein 2e-66 42
ABTW07_3910 YP_005797158.1 sul1delta fusion protein Not tested AbaR4e Protein 3e-66 42
sup AFV47978.1 sulphate premease Sup Not tested delta-AbaR25 Protein 2e-66 42
sup AEQ20903.1 sulphate permease Not tested Tn6166 Protein 3e-66 42
ABK1_0240 YP_005512812.1 Sul1delta fusion protein Not tested AbaR4d Protein 3e-66 42
sup AEZ06030.1 sulphate permease Not tested Tn6167 Protein 3e-66 42
BJAB07104_00259 YP_008207724.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 3e-66 42
BJAB07104_00275 YP_008207740.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 3e-66 42
BJAB0868_00263 YP_008211589.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 3e-66 42
BJAB0868_00279 YP_008211605.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 3e-66 42
ABZJ_00239 YP_005524195.1 sul1delta fusion protein Not tested AbaR22 Protein 3e-66 42
ACICU_00239 YP_001844898.1 MFS superfamily sulfate permease Not tested AbaR20 Protein 1e-62 41
sup ACN81033.1 sulphate permease Not tested AbaR5 Protein 1e-62 41
sulI CAJ77098.1 sulfate permease Not tested AbaR1 Protein 7e-63 41
sup AGK36657.1 sulphate permease Not tested AbaR26 Protein 7e-63 41