Gene Information

Name : swp_2799 (swp_2799)
Accession : YP_002312112.1
Strain : Shewanella piezotolerans WP3
Genome accession: NC_011566
Putative virulence/resistance : Virulence
Product : Regulatory protein, LuxR:Response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2942791 - 2943282 bp
Length : 492 bp
Strand : -
Note : -

DNA sequence :
TTGATTTCAGTATATTTAGTCGATGACCATGAGCTAGTACGTACTGGTATTCGGCGTATTCTAGAAGATGAACGCGGAAT
AAAGGTCGTTGGTGAAGCGGGTGACGGTGAGACGGCTGTTCAATGGTGCCGTAAAAATGAAGCCGATGTCATTTTGATGG
ATATGAATATGCCAGGTATTGGTGGCTTAGAAGCGACCCGCAAAATTCTAAGGTTTCAAGCTCATGCAAAAATAATCGTG
CTGACTATACACACTGAAGATCCATTTCCTACGAAAGTGATGCAAGCTGGTGCTTCTGGTTACTTAACCAAAGGTGCAAC
CTCTCCAGAAGTGTTACAAGCTATTCGTCAAGTTGCACATGGTCAACGCTATTTATCCCCTGAAATTGCGCAACAAATGG
CTTTAAGTCAGTTTAATCAGTCTGAAGATAATCCATTTAAATCCTTGTCAGAGCGAGAGCTGCAGATCATGCTAATGATC
ACCAATGGTTAG

Protein sequence :
MISVYLVDDHELVRTGIRRILEDERGIKVVGEAGDGETAVQWCRKNEADVILMDMNMPGIGGLEATRKILRFQAHAKIIV
LTIHTEDPFPTKVMQAGASGYLTKGATSPEVLQAIRQVAHGQRYLSPEIAQQMALSQFNQSEDNPFKSLSERELQIMLMI
TNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 2e-36 47
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 2e-36 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
swp_2799 YP_002312112.1 Regulatory protein, LuxR:Response regulator receiver VFG1889 Protein 4e-38 51