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Name : swp_2587 (swp_2587) Accession : YP_002311913.1 Strain : Shewanella piezotolerans WP3 Genome accession: NC_011566 Putative virulence/resistance : Unknown Product : Seryl-tRNA synthetase, class IIa Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2712833 - 2714119 bp Length : 1287 bp Strand : - Note : - DNA sequence : ATGTTAGATCCAAAATTTTTGCGTAATGAATTAGAAGTAACCGCTGAACGTTTAGCCACTCGTGGTTTTATTTTAGATGT CGAACGTTTAGGCAAATTAGAAGAGAAACGTAAGTCACTGCAAGTCAGTACTGAAGAGTTACAAGCATCTCGTAACGCTA TCTCTAAATCTATCGGTCAAGCAAAAGCTAAAGGTGAAGATGTTGCACCGATTATGGCAAAAGTTGGAACGTTAGGTGCT GAGCTCGATGCTAAAAAAGTTGAGTTGGCAGCACTTTTAGATGAGCTTAATGCTATCGCTATGAGTGTGCCCAACCTACC GGATGAATCTGCGCCTATTGGTGCTGATGAGTCTGAGAATGTCGAAATTCGTCGCTGGGGTACACCAAAAGAGTTTAACT TTGAAGTTAAAGACCACGTTGAACTTGGCGAAACTCTCGGTGGGCTTGATTTTAAAAACGCGGTAAAACTTACCGGTTCT CGATTTATCATTATGAAAGGCCAAATTGCACGCATGCACCGCGCTCTAGCGCAGTTTATGCTAGACCTTCATACTACGGA GCACGGTTACACTGAAGCTTATGTACCATTGTTGGTAAACGAAGATAGTTTACTTGGCACTGGCCAACTTCCAAAGTTTG GTGAAGATTTATTCCATACCAAACCAGCCACAGAAGAAGGGCAAGGGTTAAGTCTTATTCCGACTGCAGAAGTACCATTG ACTAATATCGCCCGTGATTCAATTATTGATGAAGATGACTTGCCTGTCATGATGACTGCGCATACGCCATGTTTCCGTAG CGAAGCGGGCTCTTATGGCCGTGATACCCGTGGCCTTATTCGCCAACATCAGTTTGATAAAGTAGAGCTAGTACAGTTAG TTAAGCCTGAAGACTCTATGCAAGCACTTGAAGAGTTAACTGGCCATGCGGAAACTGTATTACAGAAGCTAGGCTTACCA TATCGTACGGTAGTACTATGTACTGGCGATATGGGCTTTGGCGCGGCTAAAACGTTTGATATTGAAGTTTGGCTTCCAGC CCAAGATACGTTCAGAGAGATCTCTTCATGTAGTAACATGCAGGATTTCCAGTCTCGTCGTATGCAAGCGCGTTTTAAAG CTAAATCTGCTAAGAAGCCAAGCTTACTTCATACATTAAATGGTTCTGGTCTTGCTGTTGGGCGTACTTTAGTCGCCGTG TTAGAAAACTATCAAAATGAAGACGGCTCAATCACAGTACCAGAAGTGTTACGTGGTTACATGGGTGGTTTAGAAAAAAT AGGCTAG Protein sequence : MLDPKFLRNELEVTAERLATRGFILDVERLGKLEEKRKSLQVSTEELQASRNAISKSIGQAKAKGEDVAPIMAKVGTLGA ELDAKKVELAALLDELNAIAMSVPNLPDESAPIGADESENVEIRRWGTPKEFNFEVKDHVELGETLGGLDFKNAVKLTGS RFIIMKGQIARMHRALAQFMLDLHTTEHGYTEAYVPLLVNEDSLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPL TNIARDSIIDEDDLPVMMTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPEDSMQALEELTGHAETVLQKLGLP YRTVVLCTGDMGFGAAKTFDIEVWLPAQDTFREISSCSNMQDFQSRRMQARFKAKSAKKPSLLHTLNGSGLAVGRTLVAV LENYQNEDGSITVPEVLRGYMGGLEKIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-111 | 55 |
