Gene Information

Name : swp_2145 (swp_2145)
Accession : YP_002311483.1
Strain : Shewanella piezotolerans WP3
Genome accession: NC_011566
Putative virulence/resistance : Virulence
Product : Fe-S-cluster-containing hydrogenase components 1
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0437
EC number : -
Position : 2234304 - 2234999 bp
Length : 696 bp
Strand : +
Note : -

DNA sequence :
ATGTTGGATAGACGATCCATATTAAAAATGGCCGCTGGTGGAGCAATGTTGACTCTCATCCCTAGCGCGCAACTTCAAGC
TAAGACCGCTGGAAAAAGATTGGCTATGGTGTTTGATGTTCGCCGTTGCACAGGCTGTCTATCTTGTACTGTGTCCTGTG
CAATGGAAAATCAAACTGAGGCAGGCCGTTGTCGAACGCGTGTCAACCAAGCAGCACTCGAAACCAGCTCTGGTTTGGCT
ACTCTTGCTGTACCTAATCAATGTAATCAATGTGATAACCCTCCTTGTGTCGATGTCTGCCCTGCTGAGGCAACTTACAA
ACGCGAAGAAGATGGCATTGTGGTGATCGATCATGACGAGTGTATTCATTGCCAGTTATGTGTCGATGCTTGTCCATATG
GGGCAAGACGTAAAGATGAAAGCTTAGAGACTCCTCCTGAAAAATGTAATTTCTGTATTCATCGTGTGTCAGCGGGTCTG
CTGCCTGCCTGTGTTGAAACCTGTATTGGCGAGGCACGCAGCTTTGGTGATTTAAACGATCCCAATAGCGCCGTCTCAAA
ACTGGTTGCTGATAATAAGGTATATGCCATGTTGGCAGCAGAGGGCACAAAACCAAATATCTTCTATATCGGCTTGCCTG
AACAGCCGCAAGACAAACAAATCTTGTCACTTAACTTCCTCGAATGGCAACGCTAG

Protein sequence :
MLDRRSILKMAAGGAMLTLIPSAQLQAKTAGKRLAMVFDVRRCTGCLSCTVSCAMENQTEAGRCRTRVNQAALETSSGLA
TLAVPNQCNQCDNPPCVDVCPAEATYKREEDGIVVIDHDECIHCQLCVDACPYGARRKDESLETPPEKCNFCIHRVSAGL
LPACVETCIGEARSFGDLNDPNSAVSKLVADNKVYAMLAAEGTKPNIFYIGLPEQPQDKQILSLNFLEWQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrB YP_216393.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 7e-43 45
ttrB NP_805056.2 tetrathionate reductase subunit B Virulence SPI-2 Protein 7e-43 45
ttrB NP_460350.1 tetrathionate reductase complex subunit B Virulence SPI-2 Protein 6e-43 45
ttrB CAB37414.1 tetrathionate reductase subunit B (TtrB) Virulence SPI-2 Protein 4e-43 45
ttrB NP_456142.1 tetrathionate reductase subunit B Virulence SPI-2 Protein 6e-43 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
swp_2145 YP_002311483.1 Fe-S-cluster-containing hydrogenase components 1 VFG0486 Protein 2e-43 45