Gene Information

Name : swp_1941 (swp_1941)
Accession : YP_002311285.1
Strain : Shewanella piezotolerans WP3
Genome accession: NC_011566
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1992835 - 1993578 bp
Length : 744 bp
Strand : +
Note : -

DNA sequence : 
ATGTCTGAAAAAAGCGCCATATCAGTAAGCCACCTAGTTAAATCAGTTAATACTCAAGAGGGAGAACTGACTATCCTCAA
CGGCATTAATATGGATGTCAAGCAGGGAGAGAGTGTTGCGATACTTGGGCCGTCCGGTTCTGGTAAATCAACACTACTAG
GCTTGCTTGCAGCACTCGACTCTCCGAGTCAAGGCTCCATTTTGCTTGATGGTGTGGCATTGGAGACTCTGAATGAGGAA
TCTAAGGCTGCACTTCGAAAGCAAAAAGTAAGCTTTATTTTCCAATCTTTTATGTTGGTCGATACCTTAAATGCACTTGA
GAACGTTATGTTACCCGCAGAACTTGCTGGGATCCCAAATGCGAAAGACAAATCTCAAGCGATGCTAGAGCGTGTTGGAT
TAAGCCATAGATTGAACCACTTCCCTAACCAATTATCAGGTGGGGAGCAACAGCGAGTGGCGATTGCCCGAGCTTTCATC
TGCGAGCCCAAAGTGTTGTTTGCTGATGAACCGACAGGCAATTTGGATTCAGCCAATAGTGATAAAATTGCCGACATGCT
GTTTGAACTAAACCGAGAGAGCGATACCACGTTAGTGTTAGTGACTCACGACATGGTTTTAGCAAGCCGTTGTCAACGTC
AGTTTATGATGGATTCAGGTAATTTAACGGAGAAATTGTCGGCACCAGCTGATGATGACGTGCTAGATGAAACAATCGCT
GAAGAGGCAAATTCATGGAGCTAA

Protein sequence : 
MSEKSAISVSHLVKSVNTQEGELTILNGINMDVKQGESVAILGPSGSGKSTLLGLLAALDSPSQGSILLDGVALETLNEE
SKAALRKQKVSFIFQSFMLVDTLNALENVMLPAELAGIPNAKDKSQAMLERVGLSHRLNHFPNQLSGGEQQRVAIARAFI
CEPKVLFADEPTGNLDSANSDKIADMLFELNRESDTTLVLVTHDMVLASRCQRQFMMDSGNLTEKLSAPADDDVLDETIA
EEANSWS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-25 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-26 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-26 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
swp_1941 YP_002311285.1 ABC transporter NC_008702.1.4606598. Protein 1e-29 45
swp_1941 YP_002311285.1 ABC transporter NC_012469.1.7686878. Protein 3e-32 42