Gene Information

Name : swp_0189 (swp_0189)
Accession : YP_002309619.1
Strain : Shewanella piezotolerans WP3
Genome accession: NC_011566
Putative virulence/resistance : Virulence
Product : General secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 204162 - 204596 bp
Length : 435 bp
Strand : +
Note : -

DNA sequence : 
ATGCAAACTCGTAATAAACAAAAAGGTTTCACGCTGTTAGAAGTGATGGTCGTTATTGTTATTCTAGGTATTTTAGCCTC
AATGGTGGTACCAAACCTAATGGGTAACAAGGATAAAGCTGACCAACAGAAAGCCGTTTCAGATATTGTTGCGCTAGAAA
ATGCGTTAGATATGTATCGTTTAGATAACAGTATCTATCCATCTACAGAGCAAGGTTTAGAAGCACTAGTACAGAAGCCA
ACTATGTCGCCTGAGCCACGTAACTACCGTGAAGATGGCTATGTTAAGCGTCTTCCGCAAGACCCATGGCGTAATGACTA
CCTACTTTTAAGTCCAGGTGAAAACGGTAAGTTTGATATCTTCAGTGCAGGTCCTGATGGCCAACCAGGTACTGAAGATG
ACATCGGTAACTGGAACCTACAGAACTTCCAATAA

Protein sequence : 
MQTRNKQKGFTLLEVMVVIVILGILASMVVPNLMGNKDKADQQKAVSDIVALENALDMYRLDNSIYPSTEQGLEALVQKP
TMSPEPRNYREDGYVKRLPQDPWRNDYLLLSPGENGKFDIFSAGPDGQPGTEDDIGNWNLQNFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 9e-46 70
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-46 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
swp_0189 YP_002309619.1 General secretion pathway protein G VFG2050 Protein 2e-46 70
swp_0189 YP_002309619.1 General secretion pathway protein G VFG0180 Protein 2e-34 57
swp_0189 YP_002309619.1 General secretion pathway protein G VFG1871 Protein 4e-34 55