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Name : swp_0188 (swp_0188) Accession : YP_002309618.1 Strain : Shewanella piezotolerans WP3 Genome accession: NC_011566 Putative virulence/resistance : Virulence Product : Type II secretion system protein Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 202874 - 204097 bp Length : 1224 bp Strand : + Note : - DNA sequence : GTGCCAGCATTTGAATACAAAGCATTAGATAAAGCGGGTAAACAGCAAAAAGGCGTTGTCGAAGCCGATACCGCTAGGCA TGCCCGTGGCCAAATTAGAGAGTTACGTTTGATGCCACTGGAAATTACTCCTGTGGTTGAAAAAGAGAGTAAGTCTAAGT CTGGTGGGGTGAGCTTTTTTAAGCGCGGAATTTCGGTTTCAGAGCTCGCATTGCTTACTCGTCAAATTGCGACGCTGGTT GCTGCAGGTCTGCCCATTGAAGAAGCGCTTAAAGCCGTAGGGCAACAGTGCGAAAAAGATCGTTTAGCCAGTATGGTGAT GGCAGTTCGTTCGCGGGTTGTTGAAGGTTATAGTTTGGCTGATTCAATGGCTGAGTTCCCTCACATCTTTGACGAGTTAT ATCGTGCGATGGTGGCATCAGGTGAAAAATCGGGTCACTTAGAAGTGGTATTAAATCGTCTTGCCGACTATACCGAGCGT CGCCAACAACTTAAAAGCAAAATGACCCAAGCGATGATCTATCCTATCGTACTCACCTGTGTTGCTGTTGGCGTGATAGC TATCTTGCTGGCTGCAGTGGTACCAGAGGTTGTAGGTCAATTTGAGCATATGGGGCAAGAGCTACCTTGGACTACCGAGT TACTGATTAGCTCCTCTGATTTTATTCGTGATTATGGTCTTATCTTACTTGGACTTATTGTTGGTCTGTTTGTGGTCATG AAACGCTTGTTAGTCGTGCCTACAAATAGAATGAAATACGATACGTTGCTACTGCGCTTACCTGTGGTGAGTAAAGTCAG TAAAAGCCTGAACACCGCTCGTTTTGCTCGAACTTTGAGTATCTTGACGGCCAGTTCAGTGCCACTGCTCGATGCAATGC GTATTGCTAGCGATGTATTGATTAACGTAAAGGTAAAAGCCGCTGTTGAAGAGGCTACGTTAAGAGTGCGTGAGGGCACA AGTTTAGGTACTGCGTTGGCAAATACTAAACTTTTTCCGCCTATGATGCTCTATATGATCACCTCTGGTGAAAAAAGTGG TCAACTCGAGCAGATGCTTGAGCGAGCGGCAGATAACCAAGATCGTGAATTTGAGTCAAATGTCACTATTGCACTGGGTG TATTTGAACCTATGTTGGTTGTTAGCATGGCGGCAATAGTGCTATTTATTGTTTTAGCTATTCTGCAGCCTATTTTGGCG CTGAATAATATTATCAGTGGTTAA Protein sequence : MPAFEYKALDKAGKQQKGVVEADTARHARGQIRELRLMPLEITPVVEKESKSKSGGVSFFKRGISVSELALLTRQIATLV AAGLPIEEALKAVGQQCEKDRLASMVMAVRSRVVEGYSLADSMAEFPHIFDELYRAMVASGEKSGHLEVVLNRLADYTER RQQLKSKMTQAMIYPIVLTCVAVGVIAILLAAVVPEVVGQFEHMGQELPWTTELLISSSDFIRDYGLILLGLIVGLFVVM KRLLVVPTNRMKYDTLLLRLPVVSKVSKSLNTARFARTLSILTASSVPLLDAMRIASDVLINVKVKAAVEEATLRVREGT SLGTALANTKLFPPMMLYMITSGEKSGQLEQMLERAADNQDREFESNVTIALGVFEPMLVVSMAAIVLFIVLAILQPILA LNNIISG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 5e-86 | 54 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-86 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| swp_0188 | YP_002309618.1 | Type II secretion system protein | VFG2049 | Protein | 7e-84 | 54 |
| swp_0188 | YP_002309618.1 | Type II secretion system protein | VFG0181 | Protein | 1e-78 | 48 |
| swp_0188 | YP_002309618.1 | Type II secretion system protein | VFG1870 | Protein | 2e-74 | 44 |
