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Name : swp_0186 (swp_0186) Accession : YP_002309616.1 Strain : Shewanella piezotolerans WP3 Genome accession: NC_011566 Putative virulence/resistance : Virulence Product : Type II and III secretion system protein:NolW-like protein Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 199141 - 201306 bp Length : 2166 bp Strand : + Note : - DNA sequence : ATGAATAATAAAAGGATTAGACGCAGACTAATCGCTGGTATGGTTATGGGCGCATCATTACTTGCACCACAACTTGCTTG GTCTGAGCAATATGCGGCTAACTTTAAGGGCACTGATATTCAGGAGTTTATCAACATCGTTGGTAAAAACTTGAATCGCA CTATCATTGTCGACCCTACTGTTCGCGGTAAAATCAATGTTCGCAGCTATGACCTTTTAGATGATGAGCAATATTATCAA TTCTTCCTCAACACCCTGCAGGTTTATGGCTACGCAGTCGTTGAAATGGATAACAACATCATTAAAGTCATCAAAGATAA AGATGCTAAAACGGCATCTATTCGAGTGGCTGATGATGATTCGCCAGGTTTAGGCGATGAGATGGTTACCCGTATTGTAG CGCTGTATAACACAGAAGCTAAGCAGCTCGCACCACTGTTACGCCAGTTAAACGATAATGCCGGTGGCGGTAATGTCGTT CAATATGACCCATCAAATGTATTGATGATCACTGGCCGTGCTGCAGTAGTAAATAAGTTGGTTGAAATTGTACGCCGCGT TGATAAGCAAGGTGATACTGCTGTTGAAGTGGTTAAGCTTGAGTTTGCTTCGGCAGGTGAAATCGTACGCATTGTCGACA CGCTATATCGCTCAACAGCGAATCAATCACAAATGCCTGGCCAGGCTCCAAAAGTTGTCGCTGATGAGCGTACTAACGCC GTCATCGTTAGTGGTGATGAAAAGAGCCGTTTGCGTGTTGTTAAGTTAATTAAGAAGTTAGATGCTGAACAAGCAAGTAC AGGTAATACTAAAGTACGTTATTTACGCTACGCCAAAGCTGAGGACTTAGTTGAAGTACTAACTGGGTTTGCACAGCAAC TGGTTGATGAAAAAGGTGGTTCAGCTCAAGGTGCTAACAAACGCCGCAATGAAATAAACATTATGGCGCACACGGATACC AACGCCTTGGTGATCAGTGCTGAGCCCGATCAAATGCGCACCATTGAAAGCGTGATTAACCAGCTTGATATTCGCCGCGC TCAAGTGTTAGTAGAAGCTATTATCGTTGAAGTCTCTGAAGGTGATGATGTTGGCTTTGGCGTACAGTGGGCTACCGAAG CGGGTGGTGGTACTCAATTTAACAACTTAGGCCCAACTATCGGTGAAATTGGCGCTGGTATCTGGCAGGCTCAAGGTGAA GAAGGTTCTACAGTCTGTAATGATGGAACCTGTACAGAAAATCCTGATACTCGAGGTGATATTACCTTACTAGCTCAAGC ATTAGGTAAAGTGAATGGTATGGCGTGGGGCGTGGCGATGGGTGATTTCGGTGCCTTAATCCAAGCAGTATCGAGTGACA CCAAATCAAACGTACTTGCAACACCATCAATTACCACTCTTGATAACCAAGAAGCCTCGTTTATTGTTGGTGATGAAGTG CCAATTCTAACTGGTAGCCAAAATTCAAGTAACGGCAATAGTAACCCCTTCCAAACCGTTGAGCGTAAAGAGGTGGGTGT AAAACTTAAAGTTGTGCCACAGGTCAATGAAGGTAACGCGGTTAAGTTAACGATTGAACAAGAAGTATCTGGTATTAACG GTAAAACTGGTGTCGATGTTACCTTTGCGACTCGTCGTTTAACGACTACGGTAATGGCTGATTCTGGACAGATTGTGGTG CTCGGCGGTTTGATTAACGAAGAGGTGCAAGAGTCGGTACAGAAGGTACCATTCTTAGGCGATATTCCAATTATTGGTCA TCTATTTAAGTCATCTTCAAGCGGTAAGAAAAAGAAGAACCTAATGGTGTTTATCAAGCCGACAATTATTCGTGATGGGA TCACCATGGAAGGGATTGCTGGGCGCAAGTACAACTACTTCAGAGCGCTACAGCTTGAGCAGCAAGAGCGTGGCGTGAAC TTGATGCCAAATACCGATGTGCCTGTTTTGGAAGAATGGGATCAAGAAGCTTACCTACCATCAGAAGTGAACGAAGTACT TAACCGTTATAAAGACGGCAAAGGCTTAGATACTAAGATGCGAGAAACGGATTCAACGTTGAAGAGCATCTCTGGTGGCA ATGAAGCCGAAACCGAGAAACCTGCTGAAACAACGAGTGATTCAAAGCCAGCCACCGATTCAGAGAAAGATTCAGCAGAT GAGTGA Protein sequence : MNNKRIRRRLIAGMVMGASLLAPQLAWSEQYAANFKGTDIQEFINIVGKNLNRTIIVDPTVRGKINVRSYDLLDDEQYYQ FFLNTLQVYGYAVVEMDNNIIKVIKDKDAKTASIRVADDDSPGLGDEMVTRIVALYNTEAKQLAPLLRQLNDNAGGGNVV QYDPSNVLMITGRAAVVNKLVEIVRRVDKQGDTAVEVVKLEFASAGEIVRIVDTLYRSTANQSQMPGQAPKVVADERTNA VIVSGDEKSRLRVVKLIKKLDAEQASTGNTKVRYLRYAKAEDLVEVLTGFAQQLVDEKGGSAQGANKRRNEINIMAHTDT NALVISAEPDQMRTIESVINQLDIRRAQVLVEAIIVEVSEGDDVGFGVQWATEAGGGTQFNNLGPTIGEIGAGIWQAQGE EGSTVCNDGTCTENPDTRGDITLLAQALGKVNGMAWGVAMGDFGALIQAVSSDTKSNVLATPSITTLDNQEASFIVGDEV PILTGSQNSSNGNSNPFQTVERKEVGVKLKVVPQVNEGNAVKLTIEQEVSGINGKTGVDVTFATRRLTTTVMADSGQIVV LGGLINEEVQESVQKVPFLGDIPIIGHLFKSSSSGKKKKNLMVFIKPTIIRDGITMEGIAGRKYNYFRALQLEQQERGVN LMPNTDVPVLEEWDQEAYLPSEVNEVLNRYKDGKGLDTKMRETDSTLKSISGGNEAETEKPAETTSDSKPATDSEKDSAD E |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-146 | 52 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 6e-153 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| swp_0186 | YP_002309616.1 | Type II and III secretion system protein:NolW-like protein | VFG2047 | Protein | 5e-145 | 51 |
