Gene Information

Name : swp_0180 (swp_0180)
Accession : YP_002309610.1
Strain : Shewanella piezotolerans WP3
Genome accession: NC_011566
Putative virulence/resistance : Virulence
Product : Transcriptional regulator, Cro/CI family
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 193949 - 194158 bp
Length : 210 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAATCGCTTAAAAATACTCAGAGCGGAGCGCGATTGGACCCAAGCCGATCTCGCCGACAAGCTGGAAGTGTCACG
GCAGACGATCAATGCAATAGAGAAAGGCAAATACGATCCCAGTTTACCACTCGCGTTTAAAGTCGCCCGTTTGTTTCAGA
TCCCCATAGAAGCCATCTTCGAAGATGAAGCAGAGGTCGAAGTCAGTTAG

Protein sequence :
MKNRLKILRAERDWTQADLADKLEVSRQTINAIEKGKYDPSLPLAFKVARLFQIPIEAIFEDEAEVEVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 2e-09 55
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 1e-09 55
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 1e-11 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
swp_0180 YP_002309610.1 Transcriptional regulator, Cro/CI family VFG2175 Protein 6e-10 55
swp_0180 YP_002309610.1 Transcriptional regulator, Cro/CI family VFG2168 Protein 6e-10 55