Gene Information

Name : swp_1339 (swp_1339)
Accession : YP_002310713.1
Strain : Shewanella piezotolerans WP3
Genome accession: NC_011566
Putative virulence/resistance : Unknown
Product : Riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 1357487 - 1358608 bp
Length : 1122 bp
Strand : +
Note : -

DNA sequence : 
ATGTGGTCAACTGAAGACAATCAAATGATGAGCCTAGCTATTGAGTTAGCACAAAAAGGGCTCTACACCACCAGACCCAA
TCCGTGTGTTGGCAGCGTCATCGTTAAAGATAGCGTGATTGTCGGTGAGGGTTATCATATTCGCGCTGGCGGTCCTCACG
CAGAAGTTTACGCACTTAATATGGCAGGTAATGATGCCAAAGGCGCAACCGCCTACGTTACTCTTGAGCCTTGCAGCCAT
TACGGCCGCACTCCTCCTTGTGCTAAAGCACTCATTGAGGCTGGAGTGAGCCGGGTCGTGGTTGCAGTTACAGATCCTAA
TCCGCAAGTATCAGGCCGCGGCATAGCCATGCTGCAGGATGCTGGCATTCAGGTTGATGTCGGTTTATTAACCGATGCTG
CTAAACAGGTTAACCTTGGTTTTTTAAAGCGAATGCAGCAAGGCTTGCCATGGGTGACTGTCAAGTTAGCCGCTAGCCTT
GATGGAAAAACGGCGTTATCTAACGGTGAGTCAAAATGGATTACAGGTCCAGAAGCTCGAAGAGACGTGCAGCGAATTCG
TGCGAGGCACTGTGCTTTGATAACTGGTGTTGAAACTGTCTTGGCCGACAACCCTAGTTTAAATGTACGTCACAGTGAGC
TGGGATCTTTATCAAATGAGATCGCACCAGCAGAAGTGCATCAGCCTTTGCGTGTAATATTAGACAGCCAAGCTAGGCTA
GATGCTGAATTGGCGATCTTTAGTGTAACCAGCCCTGTTTTACTTGTGAGTACTCGTGACTACCCTGAATCTGTAAAGTC
TGCTTGGCCTGCTCATGTGAGTCATCAAGTTTTGCCTGCCACAGATAACCGAGTGGAACTGCAAGCTTTACTTACATTGT
TAGGTAAAACCTGCAATTCAGTGTTGGTGGAGGCTGGCGCGACTCTTGCTGGGGCATTTGTAGCGAGTCATTGCGTCGAT
GAAATAATTTTATACCAAGCGATGAAGATACTTGGTGCTGGAGGCAGAGATCTACTTGCTCTGCCTGATTTCGAGAAAAT
GTCAGAAATCCCAAACATTGACGTAATAGATGAACGAAAAGTGGGTAAAGATACCCGCTTAACATTAAGAATGAGTAACT
AA

Protein sequence : 
MWSTEDNQMMSLAIELAQKGLYTTRPNPCVGSVIVKDSVIVGEGYHIRAGGPHAEVYALNMAGNDAKGATAYVTLEPCSH
YGRTPPCAKALIEAGVSRVVVAVTDPNPQVSGRGIAMLQDAGIQVDVGLLTDAAKQVNLGFLKRMQQGLPWVTVKLAASL
DGKTALSNGESKWITGPEARRDVQRIRARHCALITGVETVLADNPSLNVRHSELGSLSNEIAPAEVHQPLRVILDSQARL
DAELAIFSVTSPVLLVSTRDYPESVKSAWPAHVSHQVLPATDNRVELQALLTLLGKTCNSVLVEAGATLAGAFVASHCVD
EIILYQAMKILGAGGRDLLALPDFEKMSEIPNIDVIDERKVGKDTRLTLRMSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-64 48
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-64 48