Gene Information

Name : swp_1338 (swp_1338)
Accession : YP_002310712.1
Strain : Shewanella piezotolerans WP3
Genome accession: NC_011566
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG1327
EC number : -
Position : 1356990 - 1357439 bp
Length : 450 bp
Strand : +
Note : IPR003796, Protein of unknown function DUF193; IPR005144, ATP-cone

DNA sequence :
ATGCATTGTCCATTTTGCAGCGCAACAGACACTAAAGTAATTGATTCGCGACTTGTCGCTGATGGTCATCAAGTACGTCG
TCGTAGAGAGTGTGTTCAGTGCCATGAGCGTTATACCACCTTTGAAGGTGCTGAACTTGTTATGCCTCGAGTGGTGAAGC
AAGATGGTAGCCGACAGCCTTTCGATGAAGAAAAGCTCCGTGGTGGCATGCTTCGAGCCGTAGAAAAAAGACCTGTATCG
ATGGATCAAATTGAACAGTCTTTAACTAAGATTAAATCAACACTACGTGCAACTGGTGAGCGAGAAGTTAAATCTGAGAT
GATTGGTAATTTAATGATGGACCAGTTGGTTAATCTCGATAAAGTGGCCTACATACGTTTTGCATCGGTTTATCGCGCGT
TTGAAGATGTGTCAGAATTTGGCGAAGCTATTGCTAACTTGCAGAAATAG

Protein sequence :
MHCPFCSATDTKVIDSRLVADGHQVRRRRECVQCHERYTTFEGAELVMPRVVKQDGSRQPFDEEKLRGGMLRAVEKRPVS
MDQIEQSLTKIKSTLRATGEREVKSEMIGNLMMDQLVNLDKVAYIRFASVYRAFEDVSEFGEAIANLQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00288 YP_008207753.1 putative transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Not tested AbaR25 Protein 2e-42 58
BJAB0868_00292 YP_008211618.1 putative transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains Not tested AbaR26 Protein 2e-42 58