Gene Information

Name : swp_1302 (swp_1302)
Accession : YP_002310678.1
Strain : Shewanella piezotolerans WP3
Genome accession: NC_011566
Putative virulence/resistance : Virulence
Product : Regulatory protein, ArsR
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 1316600 - 1317250 bp
Length : 651 bp
Strand : -
Note : -

DNA sequence :
ATGGCAGCGCTCGCGACCGCTATGTCAGACCCTTCTCGAATGAAGATTTTATGTGCATTAATGAACGGCAAAGCTTGGAC
AGCGACTGAGTTAAGTGTAATTGCAGAGATTGCCGCATCAACAACCAGCTCTCACTTATCTCGCCTGCTAAAAGCAAATT
TAGTGACATGTTTATCTCAGGGGCGGCACAAATATTTTCGTCTTTATAGCAACAGCATTGCTTTATTACTTGAGAATATG
ATGGGAGTGACTTTTCAAGTCAGTCAGCAGCCTCACTCTAAAGTACCTCAAGAACTATTAAAAGCACGAACCTGTTATGA
CCATTTAGCGGGTGAAATAGCGGTTAAATTGTATGACTCTCTAGTCACAAATGGTTGGATTAATAGTGATGGCAACGATG
TTACAGCACTAGGGAAAGAAAAGTTCTTACAGTTAGGTATTGAGCTAGATATCAAAACTAATCGAAAAAAGTGTTGTCCG
TGCTTGGATTGGAGTGAAAGGAAATTCCATGCTGGTGGTTACTTAGGCGCCTGCTTGCTCACCTTTTTTGAAAGTAATCA
TTGGATTGAAAGAGTGCATGGATACCGAGAAGTCACAATAACAAAAAAAGGTTACCAGCAACTTCATCGTCACTTTCTGA
TTAATCAATAA

Protein sequence :
MAALATAMSDPSRMKILCALMNGKAWTATELSVIAEIAASTTSSHLSRLLKANLVTCLSQGRHKYFRLYSNSIALLLENM
MGVTFQVSQQPHSKVPQELLKARTCYDHLAGEIAVKLYDSLVTNGWINSDGNDVTALGKEKFLQLGIELDIKTNRKKCCP
CLDWSERKFHAGGYLGACLLTFFESNHWIERVHGYREVTITKKGYQQLHRHFLINQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AEA34669.1 hypothetical protein Not tested Not named Protein 6e-58 56
unnamed AAL08443.1 unknown Not tested SRL Protein 9e-43 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
swp_1302 YP_002310678.1 Regulatory protein, ArsR VFG1034 Protein 5e-43 50