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Name : CFPG_538 (CFPG_538) Accession : YP_002309212.1 Strain : Candidatus Azobacteroides pseudotrichonymphae CFP2 Genome accession: NC_011565 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 770479 - 771753 bp Length : 1275 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTTACACTCAAAACTATTACAGACAATACGCAAGCAGTAATAATCAAATTGGCAAAAAAACATTTCGATGCCAAAGA TATTATCACGGAAGTAGTTAAAGTTGATGAAAAACGGAAGTCTATCCAGATTCTATTAGATAGAAACTTTTACAAACTAA AAAAGATGTCAAAATCCGTAGGACAATTAATAATAAAAAGAGGACAAGAGGAAGAAGTAAAATTAATTCGTAAGCAAGTA GTTCATTTGAAGGAAGACAACAAGAAGTTAGAATCTGAAATGAAAAAGGCAGAAAATAAAATAACAGAATTGCTTTATCA AATTCCAAATCTTCCATCCGATCAAGTACCTGTGGGAAAATACTCAAAAGATAATGTAATTGAAAAAAGAGAGGGACAAA TTCCATTTTTATCTTCTAATGCTTTACCTCATTGGGAATTGGCGAAGAAATATGATTTAATTGATTTTGAATTAGGTGTC AAAATTACTGGTAGTGGATTTCCGGTCTATAAACAAAAAGGAGCTCAATTACAACGAGCTTTAATCAATTTTTTTTTAGA TAATGCTCGCAAAGCCGATTATATAGAAATTCAGCCTCCTTATATGATAAATGCACGTTCTGCATATGGGACAGGACAAT TACCTGACAAAGAGGGACAAATGTATCATTATGAAATGGATGAATTGTATTTAATTCCGACAGCTGAAGTCCCTCTAACG AATATTTATCGTAATATAATTCTGGATGAAAAAGATTTGCCTATTAAAAATACAGCTTATTCAGCATGTTTTCGCCGAGA AGCTGGCTCTTATGGGAAAGATGTACGTGGTTTGAATCGTTTGCATCAATTTGACAAAGTAGAAATTGTTCGTATTGATA CACCAGATCATTCTTATGAATCATTACAAGAAATGGTGAGCTATGTGCAAACACTAATAGGAAAATTAGAATTGCCATGG AGACTTTTGCGTCTTTGCGGAGGAGATATGAGTTTTACTTCTGCCTTAACTTTTGATTTTGAAGTATATTCAGCAGCACA AAAGCGCTGGTTGGAAGTCAGTTCAGTTTCTAATTTTGAAAGCTACCAAGCTAACAGACTAAAATGTCGTTATCGTGGGA AAGATAAAAAAATACATTTGTGTCATACATTAAATGGTAGCGCTTTAGCATTGCCAAGGATTGTCGCTGCACTGATAGAA AATAATCAGACATCGGTAGGGATTAAAATCCCCAAAGCATTAACTCCTTATACACAATTTGACTTTATTCCCTAA Protein sequence : MLTLKTITDNTQAVIIKLAKKHFDAKDIITEVVKVDEKRKSIQILLDRNFYKLKKMSKSVGQLIIKRGQEEEVKLIRKQV VHLKEDNKKLESEMKKAENKITELLYQIPNLPSDQVPVGKYSKDNVIEKREGQIPFLSSNALPHWELAKKYDLIDFELGV KITGSGFPVYKQKGAQLQRALINFFLDNARKADYIEIQPPYMINARSAYGTGQLPDKEGQMYHYEMDELYLIPTAEVPLT NIYRNIILDEKDLPIKNTAYSACFRREAGSYGKDVRGLNRLHQFDKVEIVRIDTPDHSYESLQEMVSYVQTLIGKLELPW RLLRLCGGDMSFTSALTFDFEVYSAAQKRWLEVSSVSNFESYQANRLKCRYRGKDKKIHLCHTLNGSALALPRIVAALIE NNQTSVGIKIPKALTPYTQFDFIP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-67 | 44 |
