Gene Information

Name : CFPG_303 (CFPG_303)
Accession : YP_002308977.1
Strain : Candidatus Azobacteroides pseudotrichonymphae CFP2
Genome accession: NC_011565
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 414808 - 415704 bp
Length : 897 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGAAAATAAAAAAAGAAACTGGAACAGTTACTGTAAAAAGAGGTTTAGCAGAAATGCTAAAAGGTGGAGTAATTATGGA
TGTTGTTAACCCAGAGCAAGCGAAAATTGCAGAAGAAGCAGGAGCAGTGGCAGTTATGGCATTGGAACGTGTCCCTTCCG
ATATCCGTTCTCAAGGAGGAGTAGCACGTATGTCTGACCCGGAAGTGATTGTTAGCATTCAGCAAATAGTATCCATACCA
GTTATGGCCAAAGTTCGCATTGGACATATTGCAGAAGCACGCATATTAGAAGCCTTGGATATCGATTTTATTGATGAAAG
TGAAGTATTAACTCCTGCAGATGAATCCTACCATATTCTAAAAAGCGATTTCAAAGTCCCATTTGTATGTGGTGCACGCA
ATTTAGGTGAGGCATTAAGGCGTATCGGAGAAGGAGCATCAATGATACGTACAAAAGGTGAAGCCGGAACTGGTGATATA
GTTGAAGCTGTCCGCCATATACGAAAAATAAATGAAGATATTCGACGAGTAATGAGTAGTACTACACAAATGGAGTTAAT
GACAATAGCCAAAGGATTTGGAGCGCCATACGAGTTAGTATTGCAGGTAAAAACATTAGGACATCTTCCTACAGTTAATT
TTGCAGCTGGAGGAGTTGTTACACCAGCTGACGCCGCTTTGATGATGGAATTAGGATGTGATGGAGTATTTGTTGGTTCA
GGTATATTCAAGTCAGATAATCCTGCCCAAAGAGCTAAATCTATTGTAGAAGCAGTAGCTCATTACAAAGATGCTCATCT
TCTTGTTGAAGTATCCAAAGGCCTTGGGGAAGCAATGAGAGGTCAAAGTATTGCTCAAATAGATGATAAAGACAGATTGG
CTGGACGTGGATGGTGA

Protein sequence :
MKIKKETGTVTVKRGLAEMLKGGVIMDVVNPEQAKIAEEAGAVAVMALERVPSDIRSQGGVARMSDPEVIVSIQQIVSIP
VMAKVRIGHIAEARILEALDIDFIDESEVLTPADESYHILKSDFKVPFVCGARNLGEALRRIGEGASMIRTKGEAGTGDI
VEAVRHIRKINEDIRRVMSSTTQMELMTIAKGFGAPYELVLQVKTLGHLPTVNFAAGGVVTPADAALMMELGCDGVFVGS
GIFKSDNPAQRAKSIVEAVAHYKDAHLLVEVSKGLGEAMRGQSIAQIDDKDRLAGRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-82 66
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 4e-82 66
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 5e-82 66