|
Name : rpmE2 (CFPG_021) Accession : YP_002308695.1 Strain : Candidatus Azobacteroides pseudotrichonymphae CFP2 Genome accession: NC_011565 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L31 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0254 EC number : - Position : 27804 - 28055 bp Length : 252 bp Strand : - Note : RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially g DNA sequence : ATGAAAATAGGGATTCATCCGACCAATTATCGTCCGGTTGCATTCAAAGATGTATCTAACAATGATACATTTATTGTACG CAGTACGATCGATACAAAAGAAACTATTAAAATAGAAGGTATTGTTTATCCTTTGATTAAACTGGAAATTTCTAATACTT CTCATCCATTTTATACGGGGAAGCAAAAATTGGTGGATACAGCTGGACGTGTAGATAAGTTTATGAATCGTTATAAAAAT AGGAAAAAATGA Protein sequence : MKIGIHPTNYRPVAFKDVSNNDTFIVRSTIDTKETIKIEGIVYPLIKLEISNTSHPFYTGKQKLVDTAGRVDKFMNRYKN RKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rpmE2 | NP_286687.1 | 50S ribosomal protein L31 | Not tested | TAI | Protein | 2e-13 | 44 |
| rpmE2 | NP_287095.1 | 50S ribosomal protein L31 | Not tested | TAI | Protein | 2e-13 | 44 |
