Gene Information

Name : CFPG_145 (CFPG_145)
Accession : YP_002308819.1
Strain : Candidatus Azobacteroides pseudotrichonymphae CFP2
Genome accession: NC_011565
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 170255 - 172471 bp
Length : 2217 bp
Strand : -
Note : -

DNA sequence :
ATGGCATGTTATTTGCCCGAATTAAATTTTTGGAAGATATTAATCTTAAATGGAATTATGAATAAATTTTTTTTGAAAGA
CAATAAAAAAAGCTGTAATGGCATGAATTGGGGCAAAAAAAAAGTGAGTATTGAAAAACAATCATTGCCACAAATGGGGG
CCATGTTTGATGATGATGAAGATGATGATGATGAAGCTTATCCTTCGAATATAAGAAAAAAAACTTTCAGAGGAAGCGAT
ACAACCAATGATACTAAAACGAACGATACTCCTGTAATTGACAGTTTTGGTATAGATTTGACTAAAGCATCTGAGGAAGG
ATGTTTGGATATTGTCATTGGCAGAGAAGTTGAAATTGAGCGATTATCACAAATTTTGAGCCGTAGGAAGAAAAATAATC
CAGTGCTTATTGGCGAGCCTGGTGTTGGTAAATCTGCAATTGTGGAAGGGTTGGCTTCACGTATTGTACAACGGAAGGTA
TCGCGTGTGTTGTTTAATAAACGAGTAATCAATTTAGATATGACCGCTGTAGTAGCTGGGACCAAGTATCGTGGGCAATT
TGAAGAAAGAATAAAAGCTATATTGAATGAACTTTCTAAAAATCCGAATATTATTTTGTTTATTGACGAGATTCACACAA
TTATTGGAACGGGTAGTGTTGCAGGGACGATGGATGCTGCTAATATTTTAAAACCTGCTTTAGCAAGGGGTGAAATTCAA
TGTATTGGGGCAACTACTTTAGATGAATATCGTAATATAGAGAAAGATGGGGCATTGGAAAGACGTTTTCAAAAAATAAT
GGTTGAACCGACAACGGCACAAGAAACACGTCGAATCTTGGAAAATATCAAACATCAATATGAGGATCATCATAGTGTAA
TTTACACTGATGAAGCTTTAGATACGTGTGTAAGATTAACTGAACGTTATATTAATGATCGTAATTTTCCTGATAAAGCT
ATTGATGCTATGGATGAAGTCGGGGCGAAAACGCATATTTCCAATATTGTAGTCCCGAAGAATATAGAAGAATTGGAAAC
ACGTATAGAAATACTTAAAGGACGTAAATTACAAGCGGTAAAATCTCAGAACTTTGAGGTAGCTGCAGGTTTTCGTGATG
AGGAGAGATGTTTGTCGCTTGAGTTAGAAGTTGCTAAATCCCATTGGGAGACAGAGTTGCAGGAAAATCGCCAAATAGTG
GATGGCGAGAAAGTAGCTGAAGTAGTCGCTATGATGAGTGGAATTCCGATACAAAGTATTACAAAAGCAGAAAATCAAAA
GTTATTGGAAATGGGATCCGTCCTTAGATCTGTTATTATTGGTCAGGACGAAGCTGTTCAAAAAACAGTAAGGGCTATTC
AACGCAATCGTATAGGGTTGAAGGATCCTAATAAACCTATTGGTAGTTTTATGTTTCTTGGGCCGACAGGTGTAGGGAAA
ACGTATTTGGCAAAAAAAATAGCAGAATATTTATTTGATTCAACAGATGCTTTGATTAGAGTCGATATGTCTGAGTTCAG
AGAGAAGTTCACAGTTTCGCGTTTGGTCGGAGCTCCTCCAGGTTATGTCGGATACGAAGAGGGAGGACAATTGACGGAAA
AAGTAAGACGTCGCCCTTATTCAGTTATTCTTTTTGATGAAATAGAAAAGGCACATGCCGATGTTTTTAACCTGCTGTTG
CAGGTAATGGATGAAGGTCGCTTAACTGATAGTTTGGGACGCCGGATTGATTTTAAAAATACTGTTTTAATAATGACTTC
CAATGTAGGAAGTCGTCAATTAAAAGATTTTGGACGTGGTATTGGATTTACAATTGGTACAGAAATTGGGGATCGAAAAC
ATTCACAAAGTGTGATTCAAAAAGCCTTGAATAAAACATTTACTCCTGAATTTCTGAATCGTATAGATGATATTATATTA
TTTGATTCATTGGACGAAAAGGCCATTTGTCAAGTTGTTGAACTTGAATTGAAGGAGTTTTATAAACGGGTAGAAACATT
GGGATATAAATTAAATATTGGGAATAGAGTTAAAGAGTTCATTGCTTTGCAGGCGTATGATGTGCAGCTTGGTGCAAGAC
CCCTGAAAAGGGCGATTCAACGATATTTGGAAGATGAATTAGCTGATATGATAATCAAATCCAAAGTAAAGGAAGGAGAT
ATTGTTGCTGTTGGTTTTGATGAAGAGAGTAAGAAAATAATAATGAATTGTAAATAA

Protein sequence :
MACYLPELNFWKILILNGIMNKFFLKDNKKSCNGMNWGKKKVSIEKQSLPQMGAMFDDDEDDDDEAYPSNIRKKTFRGSD
TTNDTKTNDTPVIDSFGIDLTKASEEGCLDIVIGREVEIERLSQILSRRKKNNPVLIGEPGVGKSAIVEGLASRIVQRKV
SRVLFNKRVINLDMTAVVAGTKYRGQFEERIKAILNELSKNPNIILFIDEIHTIIGTGSVAGTMDAANILKPALARGEIQ
CIGATTLDEYRNIEKDGALERRFQKIMVEPTTAQETRRILENIKHQYEDHHSVIYTDEALDTCVRLTERYINDRNFPDKA
IDAMDEVGAKTHISNIVVPKNIEELETRIEILKGRKLQAVKSQNFEVAAGFRDEERCLSLELEVAKSHWETELQENRQIV
DGEKVAEVVAMMSGIPIQSITKAENQKLLEMGSVLRSVIIGQDEAVQKTVRAIQRNRIGLKDPNKPIGSFMFLGPTGVGK
TYLAKKIAEYLFDSTDALIRVDMSEFREKFTVSRLVGAPPGYVGYEEGGQLTEKVRRRPYSVILFDEIEKAHADVFNLLL
QVMDEGRLTDSLGRRIDFKNTVLIMTSNVGSRQLKDFGRGIGFTIGTEIGDRKHSQSVIQKALNKTFTPEFLNRIDDIIL
FDSLDEKAICQVVELELKEFYKRVETLGYKLNIGNRVKEFIALQAYDVQLGARPLKRAIQRYLEDELADMIIKSKVKEGD
IVAVGFDEESKKIIMNCK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 3e-156 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFPG_145 YP_002308819.1 ATP-dependent Clp protease ATP-binding subunit VFG0079 Protein 1e-170 54
CFPG_145 YP_002308819.1 ATP-dependent Clp protease ATP-binding subunit VFG0080 Protein 8e-143 49