Gene Information

Name : TON_0840 (TON_0840)
Accession : YP_002307225.1
Strain : Thermococcus onnurineus NA1
Genome accession: NC_011529
Putative virulence/resistance : Resistance
Product : copper-transporting ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 777406 - 779334 bp
Length : 1929 bp
Strand : -
Note : P-type (copB)

DNA sequence : 
ATGATGATGGAGGATTTTAAGAAGAGATTTATAGTTTCTGCCATACTTACGATTCCAATACTGCTCCTATCTCCGCTGAT
TCAAAAGTTCCTTGGTTTTACATTCACGTTCACGGGCGATAGATATGTTCTCTTTGCGCTATCGACAGTGGTCTACTTCT
ACGGTGGGAAGCCATTCCTAACGGGAATGAGAGATGAACTTAAGAAGAAAACCCCAGGAATGATGACGCTAATTGCTCTG
GCAATCACAGTTGCCTTCTTTTACAGCTCTGCTGTGACCTTTGGATTGCCCGGAAAGACCTTCTACTGGGAGCTTGCGAC
GCTTATTGACATTATGCTTTTGGGGCACTACATAGAGATGCGTTCTGTTCTCGGCGCTTCGAGGGCTTTAGAGGAGCTAA
TAAAGCTCATGCCAACTGATGCCCACTTAATAACTCCTGAGGGAATAAAAGACGTCCCAGTGAGCCAGCTTAAGAAAGGA
GATATAGTCCTAGTTAAACCTGGGGAAAAGATACCCTCTGATGGCATCATAATTGAGGGTGAGACGAGTGTAAACGAGGC
AATGCTCACCGGTGAGTCAAAACCTGTCTATAAGAAACCCGGCGACATTGTTATAGGTGGTTCAATAAACCTAGAGGGCT
CGATTAAAGTCAGGATCGAGAAGACTGGAAAAGAGACCTACTTGATGCAGGTGGTTGAGCTTGTAAAGCAGGCCCAAGAA
ACGAGGTCGAGGACTCAAAATTTAGCTAACCGGGCAGCTTTTTGGCTTACACTCATTGCAATAACCGCTGGAAGCGTAAC
TTTAGGAACTTGGCTCTACTTAGGGAAGCCGTTTGTGTTCGCTTTGGAGAGAATGGTCACCGTGATGGTAATTACATGCC
CCCACGCTTTGGGATTGGCTGTTCCTTTAGTAGTCTCAGTGTCAACGTCAATATCAGCGAGGAAGGGAATACTCATTAGG
AATAGAGAAGCCTTTGAGAGGGCAAAGGATGTTCAGGTAGTTGTCTTTGACAAGACGGGAACCTTGACCGAAGGAAAATT
CGAGGTAACAGATGTAATTCCACTGGATGAGCTGGAGGAGGAAGAAATCCTGCGGTACGCGGCAGCGCTGGAGAGCCACT
CATCACACCCGATAGCGCAGGGGATAGTTGAGAGGGCGAAAGAGCTCGGCCTTGAGGTTTACGAGGTTAGAGAATCAAAG
GTTCTACCGGGCAAAGGTGTCCAAGGCGTCATCAACGGAAAAGAAGTTTTCGTGGTCAGTCCAGGATTCCTCAAAGAGAA
CAACCTGTGGAGGGAGGACGAGCGCGTCAACAAGGTGCTAGATCAGGGTAAGACTGTGGTGTTCTTAATCATCAGTGGAA
AGCTGATTGGTGCCTTGGCTTTAGCCGATAAGATAAGGCCTGAGTCGAGAGAGGCGATAAAGAAACTCCACGAGATTGGG
ATTAAAGCTTACATGCTCACAGGAGACAACGCTAAAGTTGCAAAGTGGGTTGCAGAGGATCTTGGTCTGGATGGCTACTT
TGCTGAAGTTCTGCCCCATCAGAAGTCCGAGAAAGTTAAGGAGCTTCAAGAAAAAGGCTTCGTCGTGGCAATGGTTGGGG
ATGGAATAAATGATGCTCCAGCACTAATCCAGGCTGATGTGGGTATAGCAATCGGAGCAGGAACCGATGTGGCAATAGAG
AGTGCCGATATAATCTTGGTTAAAAACGATCCGAGAGACGTCATAACAGCGATACACCTTGCAAGGGCAACCTATAGGAA
GATGGTGCAGAATTTGGCATGGGCAACTGGCTACAACACATTCGCAATTCCTTTGGCAGCAGGGGCGCTTTACAACTATG
GAATACTGTTAAGTCCAGCAGTAGGTGCTTTGCTGATGAGCTTGAGCACGGTGATAGTCGCTATAAACGCGAAGTTTTTG
AAAGTCTGA

Protein sequence : 
MMMEDFKKRFIVSAILTIPILLLSPLIQKFLGFTFTFTGDRYVLFALSTVVYFYGGKPFLTGMRDELKKKTPGMMTLIAL
AITVAFFYSSAVTFGLPGKTFYWELATLIDIMLLGHYIEMRSVLGASRALEELIKLMPTDAHLITPEGIKDVPVSQLKKG
DIVLVKPGEKIPSDGIIIEGETSVNEAMLTGESKPVYKKPGDIVIGGSINLEGSIKVRIEKTGKETYLMQVVELVKQAQE
TRSRTQNLANRAAFWLTLIAITAGSVTLGTWLYLGKPFVFALERMVTVMVITCPHALGLAVPLVVSVSTSISARKGILIR
NREAFERAKDVQVVVFDKTGTLTEGKFEVTDVIPLDELEEEEILRYAAALESHSSHPIAQGIVERAKELGLEVYEVRESK
VLPGKGVQGVINGKEVFVVSPGFLKENNLWREDERVNKVLDQGKTVVFLIISGKLIGALALADKIRPESREAIKKLHEIG
IKAYMLTGDNAKVAKWVAEDLGLDGYFAEVLPHQKSEKVKELQEKGFVVAMVGDGINDAPALIQADVGIAIGAGTDVAIE
SADIILVKNDPRDVITAIHLARATYRKMVQNLAWATGYNTFAIPLAAGALYNYGILLSPAVGALLMSLSTVIVAINAKFL
KV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 2e-93 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TON_0840 YP_002307225.1 copper-transporting ATPase BAC0629 Protein 0.0 70
TON_0840 YP_002307225.1 copper-transporting ATPase BAC0079 Protein 2e-126 48
TON_0840 YP_002307225.1 copper-transporting ATPase BAC0383 Protein 3e-106 46
TON_0840 YP_002307225.1 copper-transporting ATPase BAC0101 Protein 9e-88 42
TON_0840 YP_002307225.1 copper-transporting ATPase BAC0622 Protein 4e-84 41