Gene Information

Name : kdsB (CbuK_1381)
Accession : YP_002305702.1
Strain : Coxiella burnetii CbuK_Q154
Genome accession: NC_011528
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 1342983 - 1343744 bp
Length : 762 bp
Strand : -
Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS

DNA sequence : 
TTGAGAGGTAAGATGGAATTCCGAGTTATTATTCCCGCGCGTTTTGATTCCACTCGTTTACCCGGCAAAGCATTAGTTGA
CATTGCCGGCAAACCGATGATTCAGCACGTTTATGAAAGTGCGATTAAAAGCGGTGCTGAAGAGGTTGTGATTGCTACCG
ACGATAAAAGAATCCGCCAAGTCGCCGAAGATTTTGGCGCAGTGGTTTGCATGACTTCTTCCGATCATCAATCGGGTACT
GAACGTATTGCCGAGGCTGCGGTTGCGTTAGGTTTTGAAGATGATGAGATTATCGTTTGTTTGCAAGGCGATGAACCTCT
AATTCCACCGGATGCCATTCGTAAATTAGCGGAAGACTTGGATGAACATGATAATGTTAAAGTTGCTTCTCTTTGTACGC
CCATTACAGAGGTCGATGAGTTATTTAATCCGCACAGTACTAAAGTCGTTTTAAACCGGCGCAATTACGCGCTTTATTTT
AGTCACGCTCCCATTCCGTGGGGCCGTGATACTTTTTCTGATAAAGAGAACCTCCAATTGAATGGTTCTCATTACCGCCA
TGTCGGTATCTATGCTTACCGAGTGGGTTTTCTAGAAGAATATCTTTCCTGGGACGCTTGCCCCGCAGAAAAAATGGAAG
CCTTAGAACAATTGCGTATATTGTGGCACGGGGGCCGTATTCACATGGTGGTCGCTAAAAGTAAATGTCCTCCGGGTGTC
GACACGGAAGAAGACATCGAGCGAGTTAGGGCTTATTTTTAA

Protein sequence : 
MRGKMEFRVIIPARFDSTRLPGKALVDIAGKPMIQHVYESAIKSGAEEVVIATDDKRIRQVAEDFGAVVCMTSSDHQSGT
ERIAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTKVVLNRRNYALYF
SHAPIPWGRDTFSDKENLQLNGSHYRHVGIYAYRVGFLEEYLSWDACPAEKMEALEQLRILWHGGRIHMVVAKSKCPPGV
DTEEDIERVRAYF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 6e-40 42
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 3e-39 41
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 2e-39 41