Gene Information

Name : lolD.1 (CbuK_0105)
Accession : YP_002304571.1
Strain : Coxiella burnetii CbuK_Q154
Genome accession: NC_011528
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 97851 - 98516 bp
Length : 666 bp
Strand : -
Note : -

DNA sequence :
ATGATTGAATTTAAAAACATCACTAAAGTGTATCAGTTCGGCTCGAACAGTTATAAAGCCTTAAAAGGCGTTAGTTTTTT
AATTGAAAAAGGCGAACTCGTTGGAATTATCGGGGCATCTGGATCAGGAAAAACCACCACAATGAATATTTTGGGTTTAT
TGGATCATCCCACCAGTGGTGAATATTTATTAAGAAATAAAAATGTCGCTTATTTAAGTCCTAATCAGCGCGCGGATTTG
CGCAACCGCCATATTGGTTTTATTTTTCAATTATTCTTTTTATTACCGCGATTAAACGCGCTGCAAAACGTGGGACTTCC
TTTGACTTATCGTAATCTCAGCGGCAAGCGAATTAACAAACGCGCGCTGACCATGTTAGAAAGAGTCGGAATGGCTAAAT
TCCACCATCATAAACCCAGCGAACTTTCTGGTGGGCAACAGCAACGGGTAGCGATTGCGCGCGCGCTGGTTGGAAAACCC
GATATTATTTTAGCGGACGAGCCAACCGGCGCGTTGGACTCAAAAACGAGTCAAGAAGTGTTGGATTTATTGATTCAATT
AAATCGCGAGGAGGGCTGTACGGTGGTGTTGATTACGCACGATGAACAAATTGCCGCCCAATGTCCGCGGGTAATTAAAA
TGAACGATGGCTTGATTGTTCCATAG

Protein sequence :
MIEFKNITKVYQFGSNSYKALKGVSFLIEKGELVGIIGASGSGKTTTMNILGLLDHPTSGEYLLRNKNVAYLSPNQRADL
RNRHIGFIFQLFFLLPRLNALQNVGLPLTYRNLSGKRINKRALTMLERVGMAKFHHHKPSELSGGQQQRVAIARALVGKP
DIILADEPTGALDSKTSQEVLDLLIQLNREEGCTVVLITHDEQIAAQCPRVIKMNDGLIVP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-27 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-26 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-27 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 42
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-23 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD.1 YP_002304571.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-50 53
lolD.1 YP_002304571.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-37 46
lolD.1 YP_002304571.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 9e-31 45
lolD.1 YP_002304571.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-39 45
lolD.1 YP_002304571.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 8e-40 45
lolD.1 YP_002304571.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-33 43