|
Name : serS (CbuG_0820) Accession : YP_002303357.1 Strain : Coxiella burnetii CbuG_Q212 Genome accession: NC_011527 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 796716 - 797987 bp Length : 1272 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGACCCCAAAATATTGCGACAAAATTTAGAGCATGTTGTAGAAAAATTACGCCGCCGCGGTTTTGAAATGGATAG TGATACTTTCCTTCAATTGGAAAACAAACGCAAAGAGGCTCAATTAGCAATCCAATCTTTCCAAACTAAACGTAACCAAT TATCAAAAACCATTGGAATGGCGAAATCAAAAGGGGAAAACCCCGAACCCTTAATGGCTGAAGTATCGCAGTTAAACGAT GAATTAAAGCAGGAAGAAGCTAATTTTGAAACCATTCAGAAGGCTTTCTCTGATTTTCAATTAGCTATCCCTAATTTACC TCATGATTCAGTGCCCGATGGAAAAAGTGAAAACGATAATCGTGAAATACGACAGTGGGGCGCGCCACCCGGGTTCGATT TTACGCCAAAAGATCACACGGTTCTTGGCGAACGGGATAACCAATTGGATTTTGAAGCGGCAGCCAAATTGTCGGGCGCG CGTTTTGTGGTTTTACGGGGATCGTTAGCACGCGCCCATCGTGCTTTGGCGCAATTTATGTTGGATTTACACACCGACCA ACACGGGTATGAAGAAGTTTATGTGCCGTATTTGGTGCATGAAGAATGCTTATACGGAACAGGACAATTGCCGAAATTTC GAGAAGAGCAATTTCAAGTTGCCGGCGATCGGAATTTTTTTTTGGTTCCCACGGGTGAAGTGCCCTTGGTTAATTTAGCA CGAGACGAGATTATCGAAGCGCCAGCGCTTCCTAAAAAATGGGTGGCTCAAACTCCCTGTTTCCGCAGCGAGGCGGGTTC TTATGGCAAGGATGTACGAGGGATGATTCGCCAGCATCAATTCCAAAAAGTGGAACTTGTTCAACTGGTTCAGCCAGAAA ATTCTTATCAAGCTTTAGAAGAGATAACCCGTCAGGCTGAAAAAGTATTGCAATTATTGGCGCTTCCCTACCGGGTTGTG GAGTTATGCGCGGGCGATTTAGGGTTCGCGGCCGCAAAGACTTATGATTTGGAAGTTTGGCTGCCAAGTCAAAATAAATA CCGAGAGATTTCTTCTTGCAGCAATTGCGAGGATTTTCAAGCCCGACGTATTCAAGCGCGTTGGCGTAATCCCAAAACGG GAAAGCCTGAACTGCTTCATACTTTAAATGGTTCTGGACTTGCGGTAGGCCGCACATTGGTCGCTGTTATGGAAAACTAT CAACAAGCCGACGGGCACATTCGTGTGCCCGACGCCTTGAAGTCCTACATGGGTGGAGTGGATTATTTTTAG Protein sequence : MLDPKILRQNLEHVVEKLRRRGFEMDSDTFLQLENKRKEAQLAIQSFQTKRNQLSKTIGMAKSKGENPEPLMAEVSQLND ELKQEEANFETIQKAFSDFQLAIPNLPHDSVPDGKSENDNREIRQWGAPPGFDFTPKDHTVLGERDNQLDFEAAAKLSGA RFVVLRGSLARAHRALAQFMLDLHTDQHGYEEVYVPYLVHEECLYGTGQLPKFREEQFQVAGDRNFFLVPTGEVPLVNLA RDEIIEAPALPKKWVAQTPCFRSEAGSYGKDVRGMIRQHQFQKVELVQLVQPENSYQALEEITRQAEKVLQLLALPYRVV ELCAGDLGFAAAKTYDLEVWLPSQNKYREISSCSNCEDFQARRIQARWRNPKTGKPELLHTLNGSGLAVGRTLVAVMENY QQADGHIRVPDALKSYMGGVDYF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-102 | 51 |
